Tauraco erythrolophus (red-crested turaco): 104380609
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Entry
104380609 CDS
T08611
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo04382
Cornified envelope formation
teo04510
Focal adhesion
teo04512
ECM-receptor interaction
teo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104380609
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104380609
09142 Cell motility
04820 Cytoskeleton in muscle cells
104380609
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104380609
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
teo04147
]
104380609
00536 Glycosaminoglycan binding proteins [BR:
teo00536
]
104380609
Exosome [BR:
teo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104380609
Glycosaminoglycan binding proteins [BR:
teo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104380609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104380609
NCBI-ProteinID:
XP_009986430
LinkDB
All DBs
Position
Unknown
AA seq
1672 aa
AA seq
DB search
MLIKNFFLSLKACHGCTLSKCDCSGVKGEKGERGFPGLEGQPGLPGFPGPEGPPGPRGSK
GDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGPQGIPGCNGTKGERGFPGSP
GFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDPGFPGLPGIPGPPGSMGVPGPVGPP
GPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQIGEQKRPNDIEFQK
GDQGIPGDPGPPGLPGPQGPPGLPGGVKGEKGEQGEPGKRGKPGKDGEPGQPGRDGLPGG
PGINGAPGREGEKGEKGDMGPPGPPGIVISRPGIDATVGPKGSKGLPGLPGAKGDRGFSG
RPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGLPGVSIPGQPGLDGPRGPPGPPGPP
GPPAPSVPPGEGLCEQGPPGPPGIPGQQGFMGERGQKGDQGDTCFNCIGTGIIGPPGERG
PPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGSPGAPGRPGPKGDPGDVLTSPRMK
GDKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVAFKGEMGIPGDPGIPGLPGDK
GLPGPPGFGPQGSPGEKGVQGVSGRPGPPGVPGPKGDPGQTITEPGVPGPPGPPGRNGDP
GLPGDPGQPGQRGLSGIPGAKGEPGIPGIGLPGPPGPKGFPGTPGPPGAPGTPGRPGLDG
PPGPPGFPGQKGDRGFGVPGPPGPPGPPGTKGVQGPKGDTGFPGNPGLPGRPGFDGTPGP
KGDPGPSGPPGLPGPPGXXXXXXXXXSPGPPGPVGPPGLQGIPGEKGDPGPPGFDVPGPP
GDRGTPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKGEMGVMGAPGPPGPPGTPGRNGLP
GLKGNNGLPGPPGPPGLVGQKGVKGEAGLPGPPGKIDPKQLGAKGEKGEPGVPGIPGLSG
QKGYQGLPGDPGPPGLSGPPGVPGLPGIKGDTGLPGQPGPTGPPGLKGAMGEMGLPGPPG
IKGSQGIAGRPGQPGPAGFPGLKGDKGDPGLSGIGIPGLPGPKGDLGLPGYPGSPGSKGI
AGNPGLPGFPGSPGAKGEPGLPGFPGTPGIPGPKGIEGPPGNPGLPGPPGPVGDIGRPGP
PGPAGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPGLPGLSGQKGELGLPGPPGPPGLP
GLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGPPGVPGRPGPSGPPGPPGPEGPRG
PPGNGGLKGEKGNPGPPGPPGLTGQKGDQGPPGRQGEPGRPGLNGMKGDPGVPGVPGFPG
MKGPTGPAGPAGLTGSQGLPGPPGPPGLPGAIGRSIVVKGDPGPPGPPGQPGSKGPPGLP
GPQGLPGPIGLPGDPGRDGLPGFDGPAGRKGERGLPGQPGSRGTQGPPGPDGLQGPPGPP
GTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNERAHGQDLGTAGSCLRRF
STMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGQSIQPFISRCVVCEAPAMV
IAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECH
GRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRISRCQVCMKKT
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgctgattaaaaacttttttttgtctttaaaggcttgccatggatgcactctatccaaa
tgtgattgcagtggagtaaaaggtgaaaagggtgaaaggggatttccaggcttggaagga
cagccaggattacctggatttccaggaccagaaggaccacctggtccgagaggctcgaag
ggtgatgatggacttccagggcccattggacccaaaggcatcagaggaccgccagggctt
ccaggatttccaggaacaccaggacttcctggattaccaggacaagatgggccaccagga
cctcagggtatcccaggatgcaatggaacaaagggagagcgtggattcccaggcagtcca
ggttttcctggtttacaagggcctcctggaccccctggtctgccgggtatgaagggtgaa
gcaggtgaaataattacatccttgctgccaggacagaagggcgacccaggatttccaggt
cttccaggaatacctggtccacctggctccatgggggtaccaggtccagttggccctcca
gggcccccaggtttgacaggacctcctggtccaccggggctgccaggacctaagggtaac
atgggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggtcttcagggacct
ccagggccaccaggacaaattggagaacagaagagaccaaatgacatcgagtttcagaaa
ggagatcagggtattccaggtgatccaggtccaccaggacttcctgggccacaaggccct
cctggtcttcccggtggtgtaaaaggtgaaaaaggtgagcaaggagaaccaggcaaaaga
ggaaagcctggcaaagatggagaacctggtcagcctggtagggatggtttacctggtgga
cctggaataaatggtgctccaggaagagagggtgaaaagggtgaaaaaggtgacatgggt
ccccctggtcctcctggaattgtcatttcaagaccaggcattgatgcaacagtaggacca
aaaggtagcaaaggattgccaggacttccaggagccaaaggggaccgtggattctctggt
aggccgggcccaccgggcttgccaggttctccagggatcactactgttggacctcctggc
ccacctggcttacctggtgagagaggacagaagggagatccaggtttacctggtgtttct
attcctgggcaaccaggacttgatggaccacgaggacctccaggaccgccaggtccccca
gggccacctgcaccatctgttcctcctggtgaagggttatgtgagcaggggccgccaggt
cctccaggaattccaggacaacaaggctttatgggggagcgaggccaaaaaggtgatcag
ggagacacatgcttcaattgcataggaactggaataattgggcctcctggggagagagga
ccaccaggacctccaggtagtccaggttctcctggttttcctggaccaaaaggtgaaaag
gggcttcctggattaactggccttgtagggccaccaggattcccagggtccccaggtgct
cctgggagacctggtcctaaaggagacccaggggatgtcctgacatctccaagaatgaaa
ggtgacaaaggagaccctggcttcccaggacctccaggtcttcctggcatagatggcact
cctggacgagatggactgccaggtctacctggccctaagggagaacctggcagtgttgca
ttcaaaggagaaatgggtattccaggtgatccaggaataccaggacttcctggagacaaa
ggacttcctggacctcctgggtttggtccacaaggttcacctggtgaaaagggcgtccaa
ggtgtatctggccgcccagggcctcctggagttcctggtccaaaaggtgaccctggccag
actattacagagccaggagttcctggcccacctggtcctccaggaagaaatggtgatcca
ggtcttccaggagatcctggtcagccaggtcaacgtggcttatcaggcatcccaggtgca
aagggagagccaggtattcctggcattggactaccaggtccaccaggcccaaaaggtttc
ccagggactccaggcccccccggagctccaggaactccaggtcgccctggtctagatgga
cctcctggaccacctggtttcccaggacagaagggggatcgtggatttggagttccagga
ccacctgggcccccaggaccaccaggcacaaaaggagttcaaggacctaaaggtgacact
ggcttcccaggaaaccctggtctcccaggacggccaggttttgatggaactccaggaccc
aaaggtgaccctggaccaagtggaccaccaggactcccaggcccaccaggcnannnnnnn
nnnnnnnnnnnnnnnnnatctccaggacctccaggtcctgttggccccccagggttgcag
ggcattccaggggagaaaggagatccaggtcctccgggcttcgatgttcctggtcctcca
ggtgacagaggaaccccaggatatccaggaccccctggtctcccaggacctcagggttca
cctgggccacctggtcgggatggaatacctggatttccaggtgccaaaggtgagatgggc
gtcatgggagctcctggtcctccagggcctccaggaactcctggaagaaatggcctgcct
ggcttgaaaggtaataatggattaccaggtccgccagggcctcctggactggtaggacag
aaaggtgtcaaaggtgaagcaggcctgccaggtccacctggaaaaattgatccgaaacag
ctaggagcaaaaggagaaaaaggcgagccaggtgttccaggtattcctggtttatcagga
cagaaaggttatcaaggtctcccaggtgacccaggcccaccgggacttagtggcccacca
ggtgtgccaggattgccaggcatcaagggagacacggggcttcctgggcagcctggacca
acaggacctccagggttaaaaggtgccatgggagagatgggtcttccaggtcccccaggg
attaaaggcagccaaggaatagcagggcgtccagggcagcctgggcctgcaggatttcct
ggattgaaaggagataaaggtgaccctggtctttcaggcattggtattcctggtctgcct
ggaccaaagggtgatcttggtctgcctggatacccaggtagtccaggcagtaaaggtata
gctggaaatcctggtttgcctggatttccaggcagtccaggtgcaaaaggagaaccaggc
cttcctggattcccaggaacgccaggaattccaggaccaaaaggtatcgaggggcctcca
ggtaatcctggtctgcctggaccacccggaccagtaggtgatattggtcgtcctggccct
cctggtcctgcaggggagaagggacaacctggtcgagatggtatccctggaccagctggt
caaaagggcgaaccaggtctaccaggttttgggcgcccaggacctccaggactcccagga
ttgtcagggcaaaaaggagaactggggttacctggccctccggggccccctggacttcca
ggtctgaagggagaaccaggtttccagggattccctggtctacagggtccaccaggtcca
ccaggattaccagggccacctctggaaggtcctaaaggtagccctggcccaccaggtgtt
ccaggaaggccaggtccctcaggtcctccaggtccaccaggcccagaaggtccgcgaggg
ccaccaggcaatggaggacttaaaggagaaaaaggaaacccaggtccacctggcccacct
ggcctgactggtcaaaagggagaccaaggaccacctgggcgccagggggagcctggtcgt
ccaggtctgaatggaatgaagggtgaccccggggttccaggcgttccaggattcccaggt
atgaaaggtcccactggacctgcaggacccgctggcctcacaggcagtcaaggactgcca
ggcccaccaggtccaccaggtttaccaggtgccataggacgaagcattgttgtcaaaggt
gaccctggtcccccaggtcctccgggacagcctgggtcaaaagggccacctggattgcca
gggccacagggattgccaggtccgattggtcttcctggtgacccagggcgagacggactg
cctggttttgatggtccagcaggacgtaaaggagagagaggtcttccaggacaaccaggt
tcacgaggaacacagggacctcctggtcctgatggcttacaaggcccacctggtcctcct
ggaacagcttctgttgctcatggattccttataactcggcacagccagaccagggataca
ccactatgtccacaaggaacatcaagaatatacgatggattctctcttctatatgtgcaa
ggaaatgagagagcacatggccaagatttgggtactgcagggagctgtcttagacgtttc
agcaccatgcccttcatgttctgcaacatcaacaatgtttgtaattttgcatcaaggaat
gactattcctactggctatcaactccagagccaatgccgatgagcatggagccactgaca
gggcaaagtatccagccattcattagccgatgtgttgtgtgtgaagctcctgctatggtg
atagctgtccacagtcagaccatccagattccttcgtgtcctccaggctgggactctctt
tggattggttactctttcatgatgcacactagtgctggagcagagggctctggacaggcc
ttggcgtctcctggatcctgtttggaagaattccgctcagctccgtttattgaatgccat
ggtcgtggcacttgtaattactatgccaattcatatagtttctggctggcaactgtagag
gtgtcagaaatgttcagtaaacctcagtcagagacactgaaagctggagacttgaggacg
cgtattagtcgttgtcaagtttgcatgaagaagacgtaa
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integrated database retrieval system
