Tauraco erythrolophus (red-crested turaco): 104380649
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Entry
104380649 CDS
T08611
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03410
Base excision repair
teo04140
Autophagy - animal
teo04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104380649 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104380649 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
104380649 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
teo03036
]
104380649 (HMGB1)
03400 DNA repair and recombination proteins [BR:
teo03400
]
104380649 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
teo04147
]
104380649 (HMGB1)
Chromosome and associated proteins [BR:
teo03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
104380649 (HMGB1)
DNA repair and recombination proteins [BR:
teo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104380649 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
104380649 (HMGB1)
Exosome [BR:
teo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104380649 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
RNA_pol_3_Rpc31
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
104380649
NCBI-ProteinID:
XP_009986481
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEK
SKKKKEEEEDEDEEEEDEDDEEEEEEEDEDDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggcgatcctaagaagccgagaggtaaaatgtcttcatacgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgctcagaacgatggaagactatgtcttctaaggagaaagggaagttt
gaagatatggcaaaggctgacaagcttcgttatgaaaaagaaatgaaaaactatgtacca
cctaagggggaaacaaaaaagaagttcaaggatccaaatgcacccaagaggcctccttcg
gcttttttcttgttttgctctgagtttcgtccaaaaatcaaaggagaacatcccggtctg
tccattggggacgttgcaaagaaactgggagagatgtggaacaacaccgctgcagatgat
aaacagccttatgaaaaaaaggctgctaaactgaaggagaagtatgaaaaggatattgct
gcataccgggccaaagggaaggttgatgcaggcaaaaaagtagttgccaaggctgagaag
agcaagaagaagaaggaggaggaggaagatgaggatgaagaagaagaagatgaagatgat
gaagaggaggaagaggaggaggatgaagatgacgatgatgatgaataa
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integrated database retrieval system
