Tauraco erythrolophus (red-crested turaco): 104381244
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Entry
104381244 CDS
T08611
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
teo03021
]
104381244 (SCAF8)
03041 Spliceosome [BR:
teo03041
]
104381244 (SCAF8)
Transcription machinery [BR:
teo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104381244 (SCAF8)
Spliceosome [BR:
teo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104381244 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104381244
NCBI-ProteinID:
XP_009987223
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA
PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAGGXXXXXXXX
XXPSTTAAMSNNTPGTPVTPVTPANVAQSLPDPWVSQIANTDTLAAVAQILQSPQGQQLQ
QLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLM
DRFDFGEETEQNEEPKKETPTSQLPLVPESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQQ
PQKASPEENQEGNFGSEHSASPSQGSSQQQFLEVETNVDDSMDIQQQDMDIDEGQDVAEE
EIFEQEEKKSTVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSR
SYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIE
SINMIPPRGCAYVCMVHRQDAYRALQKLTSGSYKIGSKIIKIAWALNKGVKTEYKQFWDV
DLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEWETARSTETAKENTQTTQSAAVDKST
VITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGYSAIPPPPFLRASFNP
SQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPLVQPPLPIAQETMKDVPFTSLVLPVGT
VTSNLATPTLSAGSVFNPLPINKPESDEKGSHLADLQISSSENNRSVQSDVSSSSGLVGG
VQPPSVSSSSGLTGEGQPPSVSSSSGLAGGVQPPSVSSSSGLVGGVQPPTVSSSSGLAGG
VQLPTVSSSSSLAGGVQPTSVSSSSGLMAGVQPPNVSSSSGLLAGVHPPNVSSSPGLLTG
MQPPNVSSSSGVLAGVQPPSVSSNSGLLIMPPPNVSSSSGLMGVPPPNISSSSGLLAMQH
PAGVQNMPHLNISSQRMPGMPLIDIRPGLMPHSPGPRFPLMQPGTQRSIPPPAILDPSLH
PPPRGPFPPADIFNQTERPFGTPGRQNIDSISNPEKRLPLGGDNIDNLNRPSPVEVRDSV
GRPPVDSREGMGRPPVDGREHFARPHVDMRENFGRPGVDNLGRREHFGFNSDKHWGQRGD
YDEREHHAFPIYGGPKGFHEDRERFRHVNYRFDSRSGPNWNRGFEQDAHRDFDDRRRPWE
RQRDRDDRDFNFCREINGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKADNMPQVNGE
NTETESQPPTAQVQDDPELYEKLTSSVEINKEKSDTEADIESEPVVESTETEGT
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatcaccaaggcagcaatcaaggctataaagttctacaagcacgttgtacag
agtgttgagaaattcattcaaaagtgcaaaccggaatacaaggtacctggtctgtatgtc
attgactccattgtgagacagtcccggcatcagtttggacaagagaaggatgtgtttgct
ccaagattcagcaataacatcatcagcactttccagaacttgtaccgttgtcctggggat
gacaagagtaaaattgttagagtgctaaatttatggcagaagaataatgtgttcaagagt
gaaattattcagcctctcttggatatggcaggggggnatnnnnnnnnnnnnnnnnnnnnn
nnnnnncccagcactacagccgctatgagcaacaatacaccaggaacacctgtgactcca
gttactccagccaatgtggcccaaagtttacctgatccttgggtatctcagattgctaac
acagatacccttgctgctgttgcacagattttacagagtcctcaaggccaacagcttcag
cagttgatacagacactgcagatacagcagcagaaaccacagccttcactacttcaagcc
ctggacgctggtcttgttgttcagttacaggccctcacagcacaacttacagctgcagct
gctgctgcaaacacacttaatccactggaacagagtgtctcttttaataagaagctgatg
gacaggtttgactttggggaagaaactgaacaaaatgaagagcctaaaaaggaaacaccc
acttcccaactgcctttagtaccagaatctgtgaacaactcactttttcaccaactagct
gaacagctacagcaacaaaatttagaacatctcaggcaacagcttctcgagcaacagcag
cctcaaaaggcaagccctgaggagaatcaagaaggaaattttggttcagagcactctgcg
tcaccatcacaaggaagtagtcaacagcagtttttagaagtggaaacaaatgtagatgat
tcaatggatattcaacaacaggacatggatatagatgaaggacaggatgttgctgaagaa
gagatctttgaacaagaagaaaagaagtcaactgttcgttcaagatcaagaactcgttca
agatctcgttcaaggtcaccaagaaaacgaaggtctagatcacggtctggttctcgtaaa
cgcaaacatagaaaacgttcacgctcaaggtcaagagaaaggaagagaaagtcgtctagg
tcttattccagtgaaagaagggctagggaaagggaaaaagaacgtcagaaaaagggattg
cctcctatacggtcaaaaacactaagtgtttgcagtactactctttgggtaggtcaagta
gacaagaaggctacacagcaagatttaactaacttgtttgaagaatttggacaaatagag
tcaattaacatgattcccccaagaggttgtgcttatgtctgtatggttcatagacaagat
gcttatcgtgctcttcagaaacttacttctgggtcctataaaattgggtctaaaattatt
aagattgcctgggctttgaataaaggtgtgaaaacagaatacaagcaattctgggatgtg
gatctgggagtttcatatattccttgggagaaagtaaaattggatgatttggagggcttt
gctgagggtggcatgattgaccaggaaacagtaaatacagaatgggaaacagccagaagc
acagaaactgctaaagaaaatactcaaactacgcagagtgctgcagttgataagagtaca
gttattacaacgcagacagaagcttacacgcaaccagtcactatgctgcagattccagta
gctccagctgtgcctgctgttagcttggttccacctgcgtttccggtcacaatgtctgtc
cctcctcctggttatagcgcaattcctcctccaccctttttgcgagcaagtttcaaccct
tcacagccacctccgggttatatgcctcccccagttccacctgtggtcccaccacctgtt
gtcccaccacctgttgtcccaccagttgttccaacacctttagtacagcctccgttacca
attgcacaagagacgatgaaggatgttccttttactagccttgttctgcctgttggcaca
gttactagcaatctagctactccaacattatctgctggaagcgtttttaatcctctgcca
atcaacaaaccagaatcagatgaaaagggatcacatcttgcagaccttcagatttcttcc
agtgaaaacaatagatctgtgcaaagtgatgtgtcaagtagctctggacttgttggagga
gtgcagccacccagcgtctcaagcagctctgggcttactggagaagggcaaccacccagt
gtctcaagtagctctggacttgcaggaggagtacagccacccagtgtttcaagcagctct
ggacttgtcggcggagtgcaaccgccaactgtttcaagcagctctggtcttgcaggagga
gtgcagctacctactgtctctagtagctcttctcttgctggtggagttcagccaaccagc
gtctcaagtagctctggacttatggctggagtgcaaccaccaaatgtctccagtagctca
gggcttctagctggagtgcatccacccaatgtctcaagcagccctggccttctgacagga
atgcagccacccaatgtctcaagcagctcaggagttctggcaggagtacagccaccaagc
gtctcgagcaactctggacttctcataatgccaccacccaatgtttcaagtagttctgga
cttatgggagtgccaccaccaaatatttcaagtagttctggacttctggcaatgcagcat
ccagctggggttcaaaacatgcctcatttaaatattagtagtcaaaggatgccgggaatg
cctctcatagatatccgtccaggcctaatgccccattcgcctggaccaaggtttccatta
atgcagccaggaacgcagcgtagtattcctcctccagcaatccttgatccatctcttcac
ccaccgcctcgaggtccttttcctccagcagatatttttaatcaaacagaaagacctttt
ggaacaccaggaaggcaaaatatcgatagcatttctaatccagagaaaagactaccactt
ggaggcgataacattgataatcttaacagaccgtctccagtggaagtcagagattctgtt
ggacgaccaccagttgattcaagagagggtatgggaaggcctccagtagatggaagagaa
cactttgccagaccacatgtagacatgagagaaaatttcggaagaccaggtgtagataac
cttggtcgaagagagcattttggtttcaattcagacaagcactggggacagagaggagat
tatgatgaaagagagcaccatgccttccctatttatggtggccctaaaggcttccatgaa
gacagagagaggtttcggcacgtaaactataggtttgatagtagaagtggtcccaattgg
aacagaggatttgaacaagatgctcacagagattttgatgaccgcagaagaccctgggaa
agacagagggatagggatgacagagattttaatttttgcagagaaattaatgggaacagg
tttggaagagacagaatgtcaaacaactggatccctcctccacatccacgggtttttgaa
tattttgatggggccacttcccaacgcaaagctgataatatgccccaggtaaacggtgaa
aatacagagacagaaagtcagccaccaactgcacaagtgcaggacgatccggaactttat
gaaaaactgacatcttccgtcgagataaacaaagagaagagtgacacagaagctgatata
gaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
