Tauraco erythrolophus (red-crested turaco): 104384052
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Entry
104384052 CDS
T08611
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104384052 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
teo03041
]
104384052 (CDC40)
Spliceosome [BR:
teo03041
]
Complex C
Other components
Step II factors
104384052 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
104384052
NCBI-ProteinID:
XP_009990667
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSIDNPE
VATKYIGSVEEAEKNQGLTVFETGQRKIEKRKKFKENDASNIDGFLGPWAKYVDEKEVAK
PSEEEQKELDEITAKRQKRGKVEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRS
SVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHILLSCSMDCKIKLWEVYGDRRCLRT
FIGHSKAVRDICFNNAGTRFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDK
QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW
DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV
AGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRLKAHDKVCIGAVWHPHETSKVI
TCGWDGLIKLWD
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacctgagtttggaccagaaaatccatttaggactcagcaaatggctgcacct
agaaatatgctttctggatacgcagaaccagctcacatcaatgatttcatgtttgaacaa
caacgaagaacatttgcaacctatggttatgcattagatccctctatagataaccctgaa
gttgctaccaaatatattggttctgtagaagaagctgaaaaaaatcaaggtttaacagtg
tttgaaacaggacaaaggaaaattgaaaaaaggaagaaattcaaggagaatgatgcatct
aatattgatggttttctgggaccatgggcaaagtatgttgatgaaaaagaagtagccaaa
ccatcagaagaagaacagaaagagttggatgaaataacagctaagaggcagaagagagga
aaagtagaagatgataaacctggagaggagaagactatattacatgttaaggaaatgtat
gactatcaggggagatcttatcttcatgtccctcaagatgttggagttaatctccgttct
tcagtaccaccagagaagtgctatcttccaaagaaacaaatccatgtgtggtctggacat
acaaagggtgtcagtgcagttagattgtttcctctctctgggcatatactgttgtcttgc
tctatggattgcaaaattaagctatgggaagtatatggtgatcgaagatgtctacgaacg
tttattggacatagtaaagctgttcgagacatctgttttaataatgctggcactcggttt
cttagtgctgcatatgaccgctatcttaaactctgggacactgaaacagggcaatgtatt
tcaagattcacaaacaggaaggttccttattgtgtcaagttcaatcctgatgaagataaa
caaaatctctttgttgcaggaatgtcagataagaaaattgtgcagtgggatattcgaagt
ggtgagattgtgcaggaatacgataggcatttgggagctgtcaacaccattgtgtttgtg
gatgaaaatagaaggtttgtgagtacatctgatgacaagagtttaagagtctgggaatgg
gatattcctgtagacttcaagtacatagctgagccaagtatgcactcgatgccagccgtg
actttgtctccaaatgggaaatggttggcctgtcagtcgatggataaccaaattctgatt
tttggagctcagaacagattcagattaaacaaaaagaaaattttcaaaggtcacatggta
gctggctacgcttgtcaagtggatttttcacctgacatgagctatgtgatatctggagat
gcagatggaaaacttaacatctgggactggaagacaacaaaactctacagcagattaaaa
gcacatgataaagtctgtatcggcgcagtgtggcatccacacgaaacatctaaagtcatt
acgtgcggctgggatggtcttattaaactgtgggactaa
DBGET
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