Tauraco erythrolophus (red-crested turaco): 104384401
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Entry
104384401 CDS
T08611
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03030
DNA replication
teo03410
Base excision repair
teo03420
Nucleotide excision repair
teo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104384401 (RFC1)
03410 Base excision repair
104384401 (RFC1)
03420 Nucleotide excision repair
104384401 (RFC1)
03430 Mismatch repair
104384401 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
teo03032
]
104384401 (RFC1)
03400 DNA repair and recombination proteins [BR:
teo03400
]
104384401 (RFC1)
DNA replication proteins [BR:
teo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104384401 (RFC1)
DNA repair and recombination proteins [BR:
teo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104384401 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_14
Rad17
PTCB-BRCT
AAA_22
AAA_30
AAA_5
BRCT_2
RuvB_N
RNA_helicase
AAA_16
AAA_18
AAA_7
AAA_17
AAA_33
nSTAND3
NTPase_1
AAA_19
TCAD2
Motif
Other DBs
NCBI-GeneID:
104384401
NCBI-ProteinID:
XP_009991091
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MAATPGGSGTKQDIRKFFGVVPPGKRQECETAKKSEKIKNGEGPSSGKKRGKETKVNNSP
SEDDTKQKRTNKKRRIIYDSDSEEEVQSVKKSKPPSEKKAAPSKLGKVLKQDPVVYISET
DEDDDFVNKRISLKPKENGTSVIGCTGTTTVKKEDVKPRVKSKPLSPVKQTPTSALDFFG
TSSVQRSEKKLVASKRKEPSQSRDSTVDDEAIARQLQLEEDTELERQLHEDEEFAKTLAM
LDETPRKKKARKDSGGEQTVLNIKSSPNMTERYKQSERVKATDSTGEAKDSTAKQQTKSE
HSKESRLSPQSSDGKTARGVKDKTLPLKPSTKLVSLKQKEEIAEKERGAQSLVSKEKTVS
RKEEKTTPKKEKISPKKAESVSPEDSEKRRINYQAYRSFLNREGPKALGSKEIPRGAENC
LEGLTFVITGVLECIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKREKALTLG
TKVIDEDGLFDLIRTMPGKKSKYELAAETEAKKAESRPKKTPQKTEAGKRNFSPFKREAD
NKKMKSTPEKGDTVKSVKKETTAVRKLTDFERQTVEKKEASKPQGSLVSGVNEDGTERLL
WVDKYKPVSLKAIIGQQGEQSCANKLLRWLRNWQKNASEDGQAKTNKTGGKDDGTGFKAA
LLSGPPGVGKTTTASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTS
SSVSGKHVLIMDEVDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCF
DLRFQRPRLEQIKGAMMSVAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSL
TYDEAKTDASRAKKDIRLGPFDVVRKVFAIGEEASRMSLIDKSDLFFHDYSLAPLFVQEN
YVHVKPAAAGGNLKKHLMLLSRAADSICDGDIVDKQIRSKQSWNLLPTQAIYASVLPGEL
MRGHMSQFPVFPSWLGKFSSTGKHDRIIQELAMHMSLRTQTCKRTVNMEYLSYLRDALVQ
PLKDLGADGVQEAITFMDSYCLMKEDIENIMEISVWGGKPSPFSKLDPKVKAAFTRAYNK
EVHLTPYSLTSVKTSKRQSGSAVTLELNEDLNVEEIQSDVDEQDTVESDAMIKQKKVKSS
KLPKREKNEETTKKEGKRKEKTRH
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacccctggaggcagtggtaccaaacaggacatccggaaattctttggtgtt
gtacctcctggaaagcgacaagaatgtgagactgcgaaaaagagtgagaaaattaaaaat
ggtgaaggaccttcaagtgggaagaaaagaggaaaggagactaaggtgaataattcaccc
agtgaagatgataccaaacaaaagcggacaaacaagaaaagaagaataatctacgattca
gattcagaagaggaggtgcagtcagtgaaaaaatccaagccgccatctgagaaaaaagca
gctccttcaaaacttggtaaagttctaaagcaggatcctgttgtttatatttcagagaca
gatgaagacgacgactttgtcaataaaagaatttctctgaaaccaaaggagaatgggaca
tcagtgattggttgtacaggaacaactacagtgaaaaaggaggatgtaaaaccacgagtt
aaaagcaaaccattatctccagtgaagcagactcccacctcggcacttgatttctttggg
acaagtagtgtccaacgatcagaaaagaaactggtggcaagtaaaaggaaagaaccttca
caaagcagagacagcacagtagatgatgaggccattgctaggcaactgcagctggaagaa
gatacagagctggagagacagctgcatgaagatgaagaatttgctaaaactttggccatg
ttggatgaaacaccgcgaaagaaaaaggctcggaaagattcaggaggagagcaaacagta
ttgaacatcaagagcagtcctaacatgacagaaagatacaagcagtcagaaagagtgaaa
gcaacagactcgacaggtgaagcaaaggattccactgcgaagcagcagactaaatccgaa
cattcaaaagaatctcgtttatccccacaatcatctgatggtaaaacagcaagaggggtg
aaggataagaccttgcctttgaaacctagcactaagcttgtgtctctgaaacaaaaagaa
gagattgctgaaaaggaaagaggcgctcaaagtttagtatccaaagagaaaactgtttca
cggaaagaagagaagacaacaccaaagaaggagaaaatttctcccaagaaagctgagtct
gtaagtcctgaggactctgaaaagaggcgaatcaattatcaagcttaccgcagcttcctt
aatcgtgagggtccgaaagcgctgggttccaaagagatacctcggggagctgaaaactgc
ttggaaggcctgacgttcgtaatcacaggtgttctggagtgcattgaaagagatgaggcc
aagtctctgattgaacgttatggaggaaaagtaactggcaatgtcagcaagaagacaaac
tatctggtaatggggcgagactgtggccaatctaaacgtgaaaaggcattaactttaggg
acaaaagttattgatgaggatggcctgtttgatctcattcgaactatgccaggcaaaaag
tccaaatatgagctggcagctgaaacagaggcaaagaaagcagagtcaagacctaaaaag
acaccacagaaaaccgaagctggaaaaaggaattttagccccttcaaaagggaagctgat
aataaaaaaatgaagtctactcctgaaaaaggagatactgtcaaatctgttaagaaagaa
accactgctgttcgaaagcttacggactttgaacggcaaacggtagagaagaaagaagcc
tcaaaacctcagggcagtttggtttctggggttaatgaagatggaacagagaggttgcta
tgggtagataagtacaagcctgtatctcttaaggcgataattggacagcagggtgagcaa
agctgtgccaataaactgctccgttggctgcgaaattggcagaagaacgcatcagaagat
ggacaagcaaagaccaataaaactggaggtaaagatgatggtactggctttaaagcagca
ttactttctggcccacctggagttggtaaaactactacagcttctttggtttgtaaggaa
ctggggtatagctacgtggagctgaatgccagtgacactcgaagtaagaacagtctaaag
gaagtagttgcggaatcacttaacaacaccagcatcaaagacttctgttctggcacatcc
tcatcagttagcgggaaacatgtattgatcatggatgaagtggatggtatggcaggcaat
gaagacagaggagggattcaggagttgattggtttgattagacacacaaagatacccatc
atctgtatgtgtaacgatcgcaaccatccgaaaattcgttccttggtccactactgtttt
gatcttcgttttcagagacctcgtctagaacagattaagggtgctatgatgtctgttgca
tttaaagaaggtttaaaaattccaccacctgctatgcaagagataatcctggcagcaaat
caggacatcagacaggttttacataatcttaatatgtggtgtgcaaaagataaatcattg
acttacgatgaggctaaaacagatgccagcagagccaaaaaggatattagactgggccct
tttgatgttgtccggaaggtttttgccattggagaggaggcttcgcgtatgtctcttata
gacaaatcagatctcttcttccatgattattccctagcacctctctttgtccaagagaac
tatgtacatgtgaaaccagctgctgctggaggaaatctgaaaaagcacttgatgcttttg
agtagagccgctgatagtatatgtgacggtgatatagtggacaaacagatacgtagcaag
cagagctggaatcttcttccgacacaggctatttatgcaagtgttctcccgggggagctg
atgagaggtcacatgtcccagtttcctgtctttcccagctggctggggaaattttcatcc
acaggcaaacatgatcgtatcattcaagaactggcaatgcacatgagtctcagaactcag
acgtgcaagaggacagtaaatatggagtatttgtcgtatttgcgggatgcgcttgtccag
cccttgaaagaccttggagcagatggtgtacaagaagctataacattcatggactcttac
tgcttgatgaaagaagatattgaaaatatcatggaaataagtgtgtggggaggcaaaccc
agtcctttttcaaagctggatcccaaggtcaaagcagcttttacacgtgcctacaacaaa
gaggtacacctgactccatattcactgacttctgtcaagacatctaagaggcagtcagga
tctgcagtgaccttagaactaaatgaagacttgaatgtggaagagatccagtctgatgtg
gatgagcaagatactgttgaaagtgatgcaatgattaagcaaaaaaaggtgaagtcttcc
aagctgcccaaaagagagaaaaatgaagaaacaacaaaaaaagaagggaaaagaaaagag
aaaacaagacattaa
DBGET
integrated database retrieval system
