Tepidanaerobacter acetatoxydans Re1: TepRe1_0217
Help
Entry
TepRe1_0217 CDS
T01495
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tep
Tepidanaerobacter acetatoxydans Re1
Pathway
tep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TepRe1_0217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tep03021
]
TepRe1_0217
03400 DNA repair and recombination proteins [BR:
tep03400
]
TepRe1_0217
Enzymes [BR:
tep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TepRe1_0217
Transcription machinery [BR:
tep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TepRe1_0217
DNA repair and recombination proteins [BR:
tep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TepRe1_0217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AEE90426
UniProt:
F4LSW3
LinkDB
All DBs
Position
227458..228405
Genome browser
AA seq
315 aa
AA seq
DB search
MMDIEKPRIELIEASADNTFGRIVVEPLERGYGTTLGNSMRRVLLSSLPGAAVTSIKIDG
VQHEFSTIPGVTEDTTEIIMNIKALAIMMHSDEPKLLRIEAQDEGEVKAKDIIADADVEI
MNPELHIATLEKDAKLFMELTLEKGKGYVTADKNKKPNHPIGVIAIDSIFTPVHKVNFNV
EHTRVGQRTDYDRLIMEIWTNGTIKPDDAVSAAAKILMDHFSLFAGLTEKPQVEDAPVEE
EKDDREKILEMPIEELDLSVRSYNCLKRAGINTIYELTQKTAEDMMKVRNLGKKSLEEVE
TKLSTFNLSLKQPED
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatggatattgaaaagccgaggattgaattgatagaagcaagtgcggataataccttc
ggaaggattgtcgtagaacctttggaaagaggctacggcacaacccttggcaactccatg
cgtcgagttcttttatcttcgctgccgggagctgctgttacttccattaagattgatggc
gtgcagcatgaattttctacgattccaggagttaccgaagatactactgagattataatg
aatatcaaggcactggcaattatgatgcacagtgacgaaccaaagctacttcgaatagaa
gcccaagacgaaggcgaagtaaaagctaaggatatcattgctgatgcagatgtagaaata
atgaatccggagttgcatattgctactctggaaaaagatgctaagttgtttatggaactt
acattagaaaaaggcaaaggttatgtaacggctgataaaaacaaaaaacccaaccatcct
ataggcgtaattgctatcgattctatctttacacctgtacacaaagttaattttaatgtg
gagcatactagggtaggtcaaagaactgactatgacaggcttataatggagatttggact
aatggcactataaaacctgatgatgcggtcagtgctgcggctaagatacttatggaccat
tttagcctgtttgcaggtttgactgaaaaacctcaagttgaagatgcacctgtagaagaa
gaaaaggatgatagggaaaaaatactggaaatgcctattgaagagttggatttgtcggtt
cggtcatataactgcttaaagcgggccggaattaacacaatatatgaactaactcagaag
acggcagaagacatgatgaaagtgcgcaatctcggtaaaaagtccttggaagaagtggaa
actaagcttagcactttcaatctttcgttaaaacagccagaggattag
DBGET
integrated database retrieval system
