Tepidanaerobacter acetatoxydans Re1: TepRe1_0708
Help
Entry
TepRe1_0708 CDS
T01495
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tep
Tepidanaerobacter acetatoxydans Re1
Pathway
tep03030
DNA replication
tep03430
Mismatch repair
tep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TepRe1_0708
03430 Mismatch repair
TepRe1_0708
03440 Homologous recombination
TepRe1_0708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tep03032
]
TepRe1_0708
03400 DNA repair and recombination proteins [BR:
tep03400
]
TepRe1_0708
Enzymes [BR:
tep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TepRe1_0708
DNA replication proteins [BR:
tep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TepRe1_0708
DNA repair and recombination proteins [BR:
tep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TepRe1_0708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
AEE90895
LinkDB
All DBs
Position
768178..771594
Genome browser
AA seq
1138 aa
AA seq
DB search
MHLHVHTNYSLLDGACEIERLAKRLTELGMKSAAITDHGVMYGVIDFYKIMLSYGIKPII
GCEVYMAARTMQDRQPGIDDDLYHLVLLAKNNEGYKNLMKLVSVGFTDGFYYKPRIDMSV
LKEYSDGLIALSACLAGKIPTLLLEGNYDQAKRTAEDFKEIFGQDNFYLEVQDHGILDQR
KIINDLIRLSKETEIPIVATNDVHYINKVDATVQDALLCIQTGKTLDDENRMKFQTSEFY
LKSSEEMEKLFSYIPDAIENTAVIAEKCNVKLDFNTIHLPSFEVPEGVTQDEFLEKLCYE
GAAERYSEITDKIKQRLDYELDTIKKMGYSSYFLIVWDFINYARKNKIMVGPGRGSAAGS
LVAYCLHITNIDPLKYNLLFERFLNPERVSMPDIDVDFCYERRQEVIDYVVKKYGQDRVA
QIVTFGTMAARAAIRDVGRVMGYPYGEVDMIAKMIPQEIGMTIENALIVNPELKKMYDEN
ERIKRLLDVAKALEGFPRHASTHAAGVVISKDPIVEHVPLHKIGDSNVATQYTMTALEEL
GLLKMDFLGLRTLTVIRDAINIIRHTKGKEVNLDKLSLDDKKVYEMLGQGNTAGVFQLES
SGMRNLLTELKPESFQDVAAIIGLYRPGPLGSGAADDFIKSKNGQKSINYLHPALKPILD
ETYGIILYQEQAMQIAQELAGFSLAQADILRKAMGKKKQDVMAAQRESFVEGCIKNGIDK
ITAGKIFDEISYFAGYGFNKAHTAAYAVIAYQTAYLKAHFPVEFMAALLTSVIDNTDKVA
YYINECRRMNIEVLPPDINESYESFTVVSDKIRFGLTAVKNVGQSVAKSIINARKDKGRF
TSFTDFIEKVCGELNKKALESLIKSGAFSSLGVKRSQLIRIYEGTLVRVQKQQKENVKNQ
ISIFEMLDDVPAFQEILPDIPEYPKAELLAMEKEMLGIYLSGHPLLEYEEELSKNVTFYI
GNKNDVNNIQDNMPVTIGGIITAINTKTTKNDKIMAFVDIEDLTGTMEAIVFPTIFEKYK
SYLLADSKVYLKGRISYKEDESPKVIVDEIIPMEKDNTARLLVIPLSGQDDTNVISDIKE
FISTHSGNTQVVIHLKDIDKSFLLNEKLDISANNLNLFTERTGLRNYLFWDKLVVGQQ
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
gtgcatttgcatgtccatacgaactatagcctcttagacggtgcgtgtgaaatagagagg
ctggctaaacgtctgacagaactgggtatgaaaagcgcagccattacagaccatggtgta
atgtatggtgtaatagatttttacaaaattatgctctcttatggaatcaagccgataata
ggctgcgaagtttatatggctgcacgaaccatgcaggaccgccagccgggaatagatgat
gatttatatcatttggttcttttggcaaaaaataatgagggctataaaaatttgatgaag
cttgtttcggtaggttttaccgatgggttttactataaaccaagaatagatatgtcggtt
cttaaagaatattcagatggtcttatagcattaagtgcttgtcttgcaggcaagataccg
actttgctgttggaaggcaattatgatcaagctaaaagaactgctgaagattttaaggaa
atattcggacaagacaatttttacttagaagttcaagaccatggcatattagatcagaga
aaaataatcaatgaccttatacgtttaagtaaagaaactgaaatccctattgtagcaaca
aatgatgtccattatattaataaagttgacgcaacggtgcaagatgctcttttatgtata
caaacagggaaaaccttagatgatgaaaacagaatgaaattccaaacttcagaattttat
ttgaaatcatcggaagaaatggaaaaactcttttcatatatcccagatgccattgaaaac
actgccgtaattgccgaaaaatgcaatgtaaaactggactttaatacaatacatctgccc
agctttgaagttccggaaggcgttacgcaggatgaatttctggaaaaattgtgctatgaa
ggtgcggctgaaagatattccgaaattacggataaaatcaaacagcgtttagattatgag
ttagatacaattaagaaaatgggttattccagttattttctgattgtatgggattttatt
aactatgcacggaaaaataaaatcatggtaggacccggaaggggatctgccgccggcagc
cttgtagcttattgcctgcatattactaatattgatccgttaaagtacaatcttctattt
gagcgctttttaaaccccgagcgagtatctatgccggatatagatgtggacttctgttat
gagcggcgtcaggaggttattgattatgtcgtcaagaaatatggccaagatcgagtagca
caaattgtaacatttggaacaatggctgcccgagctgctattagggatgtaggcagagtt
atgggatatccttacggcgaagtggatatgattgcaaaaatgataccacaggagataggc
atgactatcgaaaatgccttgatagtaaatcctgagcttaaaaaaatgtatgatgaaaat
gaaagaatcaagcgtcttttagatgtagctaaagctcttgaaggtttcccgcgccacgca
tcgacacatgctgcaggtgttgtaatatcaaaagacccaattgtagaacatgttcccttg
cataaaataggcgattctaatgtggcaacacagtatacaatgactgctcttgaagaacta
ggccttttaaaaatggattttttagggctgcgaactttgacggttataagggatgctata
aacattatccgccacacgaaaggtaaagaagtaaatcttgataaactttcgttagatgat
aaaaaagtttacgaaatgctagggcagggaaacactgcaggggttttccagcttgaaagt
tcaggtatgagaaatttacttacggaattaaaacccgaatcttttcaggatgtggcagca
ataataggtttgtatcgaccgggtccgctaggaagcggtgcagccgatgattttataaag
agtaaaaatggtcaaaaatctataaattacttgcatcctgcgctaaagcccatattagat
gaaacttatggaataattctttatcaagagcaggctatgcagattgctcaggagctagcc
ggtttttctttggctcaagccgatatccttcgtaaggctatgggaaaaaagaagcaggat
gttatggctgctcagagggagtcgtttgtagaaggctgtataaaaaatggcattgacaaa
ataacagcaggtaagatatttgatgaaatttcttattttgccggttatggctttaataag
gcacatactgccgcttatgccgttatagcatatcagacggcctatctcaaagcccatttt
ccggtagaatttatggctgctcttttgaccagtgtgatagacaataccgataaagtagct
tattatataaatgagtgccgccgcatgaatatagaggtcctgccgccggatataaatgag
agttacgaaagttttacagtagtgtctgataaaataaggttcggccttactgctgtaaaa
aacgtgggtcaaagtgttgcaaaatcgatcataaatgccagaaaagataaaggcaggttt
acttcttttaccgattttattgaaaaggtttgcggcgaattaaataagaaggcattagag
agccttataaagagcggggcattttcatcattaggagtaaagcgttcccaacttattaga
atctatgaaggtactttagttcgtgttcagaaacagcaaaaggaaaatgtaaaaaatcaa
atctcaatttttgaaatgcttgatgatgtccctgcatttcaggagattttacccgatatt
ccggaatatccgaaggctgaattgctggctatggaaaaagaaatgttaggcatctactta
agtggtcacccattgctggaatatgaagaagaattgtcgaaaaatgttactttctatatt
gggaataagaatgatgtaaataatattcaggataacatgcctgtaaccataggcggtatt
ataacagcaataaatactaaaactactaaaaatgataaaataatggcatttgtagacatt
gaagatttaaccgggacaatggaagccatagttttccctacaatttttgaaaagtacaaa
tcttatttgcttgcggattcaaaggtgtacctaaaaggcagaattagttataaagaggat
gaatcaccaaaggtcattgtggatgaaattattccgatggaaaaagataatacggcaagg
ctgttggtgattcccttgtccggccaggatgatactaatgttataagtgatatcaaagaa
tttatttccacacattccggcaatacacaagttgtgatacatctgaaagatatagataaa
agttttttactaaacgagaagctggacatttcggctaataatttaaatttatttactgaa
aggactggcttgagaaattatttattttgggataaattagtggtagggcaacagtaa
DBGET
integrated database retrieval system
