Tepidanaerobacter acetatoxydans Re1: TepRe1_1265
Help
Entry
TepRe1_1265 CDS
T01495
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
tep
Tepidanaerobacter acetatoxydans Re1
Pathway
tep03030
DNA replication
tep03430
Mismatch repair
tep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TepRe1_1265
03430 Mismatch repair
TepRe1_1265
03440 Homologous recombination
TepRe1_1265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tep03032
]
TepRe1_1265
03400 DNA repair and recombination proteins [BR:
tep03400
]
TepRe1_1265
Enzymes [BR:
tep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TepRe1_1265
DNA replication proteins [BR:
tep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TepRe1_1265
DNA repair and recombination proteins [BR:
tep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TepRe1_1265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DNA_pol3_a_NII
Rv2179c-like
DNA_pol3_a_NI
RNase_H_2
HHH_3
DUF655
DEDDh_C
YhfH
Motif
Other DBs
NCBI-ProteinID:
AEE91411
UniProt:
F4LU81
LinkDB
All DBs
Position
1307755..1312023
Genome browser
AA seq
1422 aa
AA seq
DB search
MINLKNIFKEEDLKIFEAEEKRLLTNIILENIVVSREKKDLDIFLLSEHVLTEQILIKIK
NILLSHLPHTNNILFHCVKVDNKNKAQALVTKVWKDLLEHIFTEAPASQMWMLNSYWELN
EKHLNIYVEPSGIEFLKERKVCPIIENFFTGLGYPLKVVFKEKTEESIKENTYDIYEEEK
EIIESILKENEFKGNGIDDDNLSPNIIGRIISGNSTPIGDFISETNDIIFSGEVFNIEKR
ELKNKTIMLTFGLTDYTGSILVKIFLSGEQKSLEFRFKEGLWLKVRGKIEKSKYSQEYEL
IPFDVNIDKKPERMDTKPEKRVELHLHTRYSSMDALCSPTEVIKMAKKWGHKAVAFTDHG
VLQSFPEIYEASKKIGIKPIYGVEAYIFDDENPVIISPPDKPIKDVTFVVVDIETTGLCF
DNDEIIEIGAVKILNNEIIDRFSSFIKPQRLIPTNIINLTGITNDMLKTARPIEKVLPSF
MEFLGDGVFVAHNAEFDSGFIRREASKLGIPFKNNILDTLALARIIFSKLKNHRLDTLAK
ELNIKMGSHHRAIDDAKTAALILQELLIKVNEAGINNLSQINDIYKLKKGATNLSSYHAT
ILVKDNIGLKNLYKLVSVSHLDFFYRHPRIPKSLLRTYRKGLLIGSGCQAGELFQSLLHF
CSYEKVKEISGFYDFLEIQPLHNNAFLIDGGYASGMQRLEELNRKIYDIGKNSGKPVVMT
GDVHFANPEDEILRKILLNAQGFQDADKESRLYFKTTDEMLNECKYLGTEIANEVVIKNP
NIIADEVNDGIVPFPDGLYPPKIAGAEQEIIDMTYRQAKKLYGEKLPPIVEKRIKHELNS
IVNNGYAVIYLIAHKLVKKSMEDGYLVGSRGSVGSSLVATMCQITEVNPLPAHYLCPICQ
TSIFEEDKQEIVGPDLPDKNCPKCGSRMKKEGFNIPFEVFMGFEGDKIPDIDLNFSGEYQ
SKAHKYTEELFGEHHVFRAGTVSTIAQKTAFGFVKAYLEEKRMQLPNIELTRLSAGITGV
KRTTGQHPGGLIIVPKDKEIFEFTPIQHPADDKGSGVITTHFEYHSISDRLLKLDLLGHD
DPTVIKMLEEETGINVQEIPLDDAETMKIFSSLTPLNLDPKVLGTSVGTLGVPEFGTRFV
RQMLEDTRPTSFSELVRISGLSHGTDVWLNNAQNIIKNNIATLKDVIATRDDIMIYLINK
GINSKTAFNIMEDVRKGRCLKPEYEKLLMENSNIDSWFIESCKKIKYLFPKAHAVAYVVM
AFRIAYFKVHFPEAFYATYFTVKADDFDAELILQGPKKIMETMNEIEKKEKEATAKEKNI
FTLLEVAHEMYMRGIQFVPIDLYKSDVKRFKITKDGILPPLSALQGLGITAAQNIKKERN
KGRFTSIDDLQQRTKITKTVVQILKQNSILNGLQETDQISLF
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccttaaaaatatatttaaagaagaggatttaaaaatatttgaagctgaagaa
aagagattgttaacaaatattatattagagaacatagttgtttcaagggaaaagaaagac
ttagatatttttttactttcagaacacgttttaaccgaacaaatattaattaaaataaaa
aatatattattgtctcatttgccgcatactaataatattttgtttcattgcgtcaaagta
gataataaaaataaagctcaagcgctagttacaaaagtatggaaagaccttttagaacac
atatttactgaagctccggcatcacaaatgtggatgcttaacagctattgggaattaaat
gaaaaacatctgaatatttatgttgaacctagcggaatagagtttttaaaagaacgtaag
gtatgccctattatagaaaattttttcacaggtttagggtatcctttaaaagttgttttt
aaagaaaagactgaggaaagtataaaagaaaacacatatgacatttatgaagaggaaaaa
gaaataatagagtctatcctcaaagaaaatgaatttaaaggtaatggaattgatgatgat
aacttatctccaaatataattggaagaataatttcaggcaattcaactcctataggtgat
tttattagtgaaactaacgatattatcttttctggcgaggtctttaatattgaaaaacgt
gaattaaaaaataagacaataatgcttacatttggtttaactgactatactggttcaatt
ttagtaaaaatatttctttcaggtgaacaaaaatccttagaatttagatttaaagaaggc
ctttggttaaaagttcgcgggaaaatagaaaagagtaagtacagtcaggagtatgaattg
attccgtttgatgttaatattgacaaaaagcctgaaaggatggatacaaaacctgaaaaa
agggttgaattacacttacatacacgatatagttctatggatgccttatgttcaccgaca
gaggttattaaaatggctaaaaagtggggacataaggcagttgcctttactgatcacggt
gtattgcaatctttccccgaaatatatgaggcttcaaaaaaaatcggcataaagccgatt
tatggggttgaagcatatatattcgatgatgagaatcctgttataatatcgcctccggat
aaaccaatcaaagatgtgacatttgtagttgttgatatagaaacaaccggactttgtttt
gataatgatgagattatagaaataggtgctgtaaagatacttaataatgagattattgat
aggtttagttcctttataaaaccccaaagactcatcccgactaatattataaatctcaca
ggaataacaaatgatatgctaaaaaccgcaaggcctattgaaaaggttcttccatccttt
atggaattcttaggtgatggagtatttgtggctcataacgcagaatttgattctggattc
ataagaagggaagcatctaagctcggaattcccttcaaaaataatatactggatacttta
gctttagcccgaataattttttccaagttaaaaaaccaccgattagatactttggcaaaa
gaattaaatataaaaatgggatctcaccatagagctattgatgatgcaaagactgcagcg
cttatattgcaggagctcctcataaaggtaaatgaagcaggtataaataatctttctcaa
ataaatgatatttataaattaaaaaagggcgcaacaaacctaagttcttatcatgctacg
attcttgtaaaagacaatattggtttaaagaatttatataaacttgtatctgtatcacat
ttagattttttctataggcatcctcgtataccaaaatctttacttagaacttatagaaaa
ggtttattaattggaagcggatgccaagcaggtgagctgtttcagagcttgctccatttt
tgtagctatgaaaaagtcaaagaaatatcagggttttatgactttttggagattcaacca
ctacacaataatgcctttttaatcgatggcgggtatgcaagcggaatgcaaagactcgag
gaactgaatcgtaaaatatatgatatagggaaaaattcaggaaagcctgtagtaatgact
ggtgatgtgcactttgctaatcccgaagatgaaatacttagaaaaattcttctaaatgct
cagggattccaagatgctgacaaagaatcgagattatattttaaaactactgatgaaatg
ttaaacgaatgcaaatatcttggaacagaaatagcaaatgaagtagttataaaaaatcca
aatattatagcagatgaagtaaatgacgggattgtaccgtttccagacggactatatccg
cctaaaattgcaggcgctgaacaagaaatcattgacatgacttatcggcaagctaagaaa
ctttacggcgaaaaattacctcctattgttgaaaaaaggataaaacatgaattaaattct
attgttaataatggctatgctgtaatatatcttatagcacataagctagtaaaaaaatct
atggaagatgggtatcttgttggatccagagggtcagtaggttcttctctggttgctacc
atgtgccaaattacggaagttaatccattgccggctcattatttatgtccgatatgccaa
acgtctatatttgaagaagataagcaagaaatagtgggtccggatttacctgataaaaat
tgccccaaatgtggaagtcgtatgaaaaaagaaggttttaatatcccttttgaggtattt
atgggttttgagggagataaaatccctgatattgacttaaacttttcaggagaatatcag
tcaaaagctcacaagtatactgaagaattatttggagagcatcatgtatttagagctggg
actgtttcaaccatagcacaaaaaacagcttttggctttgttaaggcatacttagaagaa
aaacgtatgcagctacccaatatcgagttaacccgtctttctgctgggattacgggcgtt
aaacggacgacaggtcaacaccccggaggcctaataatagttccaaaggataaagaaatc
tttgaatttacaccaatacaacatcccgccgacgacaagggttcaggggttattacaact
cattttgaatatcattctatcagcgatcgactgctaaaactagatttattaggtcatgat
gatcctacagtcattaaaatgttagaggaagaaacaggtataaacgtgcaagaaatacct
ttagatgatgcagaaactatgaaaatcttttcatctcttacaccattaaacttggatcca
aaggttttaggaacatcagtgggaacactgggagttcccgaatttgggaccaggtttgtt
aggcaaatgctcgaagatacgcgtccgacttcattctcagaactggttagaataagcggt
ttatcacatggcacggatgtatggcttaataatgcacaaaacattataaaaaataatatt
gcaacattaaaagatgtaattgctaccagggatgacataatgatatatttaataaacaag
ggaattaattctaaaacagcctttaacattatggaagacgtaagaaaaggtagatgcctg
aaaccggaatacgaaaaactattaatggaaaatagtaatatagattcatggtttattgaa
tcatgcaagaaaattaaatatctttttccaaaggctcatgccgtagcctatgtagtgatg
gcttttagaattgcatattttaaagtgcattttccagaagccttttatgcaacttatttt
actgttaaggcagacgattttgatgctgaactaattttacagggccctaaaaaaattatg
gaaacaatgaatgaaattgaaaagaaagaaaaagaggccaccgctaaagaaaaaaatatt
tttacactgttagaagtagctcatgagatgtatatgagaggtatccaatttgttcccata
gatttatataagtcagatgtgaaaagatttaaaataacaaaagacggtatattgccacct
ttatcggcattgcaaggcttagggattacagcggctcagaacataaaaaaggaaagaaac
aaaggaagatttacttcaattgatgatttacaacaaaggacaaagataactaaaactgtt
gtccagattttgaagcaaaatagcatattaaacggccttcaggaaactgatcaaataagt
ttgttttga
DBGET
integrated database retrieval system
