KEGG   Tepidanaerobacter acetatoxydans Re1: TepRe1_1323
Entry
TepRe1_1323       CDS       T01495                                 
Name
(GenBank) Protein hfq
  KO
K03666  host factor-I protein
Organism
tep  Tepidanaerobacter acetatoxydans Re1
Pathway
tep02024  Quorum sensing
tep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TepRe1_1323
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TepRe1_1323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tep03019]
    TepRe1_1323
   03036 Chromosome and associated proteins [BR:tep03036]
    TepRe1_1323
Messenger RNA biogenesis [BR:tep03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     TepRe1_1323
Chromosome and associated proteins [BR:tep03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    TepRe1_1323
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AEE91469
UniProt: F4LUD9
LinkDB
Position
1369940..1370197
AA seq 85 aa
MTKVQINLQDSFLNQIRKDNIPVTIYLVNGFQLKGMVRGFDNFTIVLDSDGKQQLVYKHA
VSTIAPLRTINLNQGMIDQRKTDED
NT seq 258 nt   +upstreamnt  +downstreamnt
atgacaaaagtacaaattaatcttcaggatagttttttgaatcagatcaggaaggacaat
atccctgtgacaatatatcttgttaatgggtttcagttaaaaggtatggtacggggtttt
gataattttacaattgttcttgattctgacggcaaacaacagttagtatataagcatgca
gtttctaccatagcacctttaagaacgattaatttaaatcagggtatgatagaccaacgg
aaaacagatgaagattaa

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