Taylorella equigenitalis MCE9: TEQUI_1088
Help
Entry
TEQUI_1088 CDS
T01390
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
teq
Taylorella equigenitalis MCE9
Pathway
teq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
teq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TEQUI_1088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teq03019
]
TEQUI_1088
03009 Ribosome biogenesis [BR:
teq03009
]
TEQUI_1088
Enzymes [BR:
teq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
TEQUI_1088
Messenger RNA biogenesis [BR:
teq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TEQUI_1088
Ribosome biogenesis [BR:
teq03009
]
Prokaryotic type
rRNA processing factors
TEQUI_1088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ADU92012
UniProt:
A0A654KHW9
LinkDB
All DBs
Position
complement(1147613..1150504)
Genome browser
AA seq
963 aa
AA seq
DB search
MLFNATHQEELRVAIVDGQKLLDIDIETSGREQRKGNIYKGVITRIEPSLEACFVDYGQE
RHGFLPFKEVSRNYHKSGTDHSRISEALEVGQELIIQVEKEERGNKGAALTTYISLAGRY
LVLMPNNPKGGGISRRIDWEERQELREAMSHLELPEGMSLIARTAGIGRTTEELNWDLTY
LMQLWKAIEDAANHYSAPILIYQESSLVIRALRDYFSHDITEILIDTDEIYDQVNAFMQD
VMPDNVAKIKRYRHAVPLFSRFQVEHQIETAYSRHVHLPSGGSIVIDHTEALVAVDVNSA
RSTRGGDIEETAMRTNIEAAEEVARQLRLRDLGGLIVIDFIDMEDSKNQKAVESKLKEAI
QFDRARVQMGKISKFGLMELSRQRLRPSLNEGSHIICPRCNGTGAIRDIESSALNVLRLL
QEEALKENTAVVNAQVPVDVATYLLNEKRQDIVKMEAKNQIRIYLIPSKNLETPHYNIER
IRHDESRMDELPVSYKLTDDSIEEIPSWQEKKDQPKAPEAVVKGIRRQTPAPTPSPKTKE
TNSTELTFWQKILSFFGFARKDQTPEITQTPKVKTPASKSCRKPHSSKTHKSQNHKKSSN
NDEIELKASPSASKTKSDSERLRNKPRKAKSEENSISGFTEVVQEDIATLEKKPQNRRRK
GKSKSDKPVEVVPATETAPLTQPSAEPTEIVESDSDQPKRHRNRRGRSRNKNNNNQAFVP
NEVLLEQQDILASESIKENSKSLELSHATPNAIAEPLSNKGVPSGVVSEDVPQDDKVRQN
IEAPSVSETIADFDPQSIGAEVAPKPLPRSQGRRPAEHKQSAMDRSDGRQSAMDRSDGRQ
SAMDRSDAESVGKDNVEADDSKISRKLENSKSDRSPKSIEKSEQTEHAENKFRITKKEVI
QKFVFNKEELLSVCESIGMTWIETDPSKIVEIPKVDVKLGRERKPLVPLSNEPLEQVETK
IIN
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgttatttaatgcaacacatcaggaagagctccgtgttgctattgtcgatggtcaaaag
ctacttgacattgacattgagacgtctggtcgcgaacagagaaaaggtaatatttacaaa
ggtgtaattactcgcatcgaaccttcacttgaagcatgctttgtcgattatggacaggag
aggcatggatttctaccatttaaagaggtatcccgtaattatcacaaatcaggtactgac
cattctcgtatttctgaagcccttgaagtaggacaggaattaataattcaagttgaaaaa
gaggagcgcggtaacaaaggggctgctcttacaacatacatttctttggctggacgttat
ttagttttaatgccaaataacccaaaaggcggtggcatatctaggcgtattgactgggag
gagagacaggaactacgcgaggctatgtctcatttagaacttccagaaggtatgagccta
attgcacgtacagcaggtatcggtagaaccactgaagagcttaattgggatttaacttat
ttaatgcaactatggaaagctatagaagatgcagctaaccactacagtgctccaatcctt
atttatcaagaatcatctctagtaatcagggctctcagagactatttttctcatgacatt
acagaaattttgattgatacagatgaaatctatgatcaagtaaatgcatttatgcaggat
gtgatgccggataatgttgccaaaataaagcgatatcgtcatgcggttcctttgttttca
agatttcaagttgagcaccaaattgagactgcgtattcgaggcacgtacatttaccgtct
ggaggttctattgttatcgaccacacagaggctttagttgcagttgatgtaaactctgcc
cgttctactagaggtggtgatatcgaagagactgccatgcgtacgaatattgaggccgca
gaggaagttgctcgccaactaagattacgcgatttaggtggtcttatagtgatcgatttt
atcgacatggaagacagtaaaaatcaaaaagcagttgaatctaaattaaaagaggcaatt
caatttgatagagctagagttcagatgggtaagatttccaaatttgggcttatggaactt
tcacgtcaaagacttagaccatccttaaatgaagggtcgcacataatttgtccacgatgt
aatggtactggggctattcgtgatattgaatctagtgcacttaatgtacttaggctttta
caagaagaagcacttaaggaaaatacagccgttgttaatgctcaggtacctgttgacgtt
gcaacttatcttctaaatgaaaaacgtcaagatatagtcaagatggaggccaaaaatcaa
atacgtatttatttgattccaagtaaaaatttagaaactcctcattacaatattgaacgt
attcgtcatgatgaatctcgtatggatgaacttccagtgagctacaaattgaccgacgat
tctattgaagaaattccatcatggcaggagaaaaaagatcaacctaaagctcctgaggct
gttgttaaagggatacgcagacaaacacctgccccaaccccttctcctaaaactaaggaa
accaactcgacagaacttactttctggcaaaaaatcttgtcattctttgggtttgcacgt
aaagatcaaactcctgaaattacgcaaactcccaaagtcaaaacccccgctagtaaaagc
tgtcgaaaacctcattcaagcaaaacccataaaagtcagaatcataaaaaatcatctaac
aatgatgaaattgaattaaaggcaagtccttctgcttcaaaaactaaatccgactctgaa
cgacttagaaataaaccacgtaaagcgaaatctgaagagaatagtatttctggatttact
gaagtggtgcaagaggacattgccaccctagagaaaaaaccccaaaacagacgtcgtaag
ggaaaatctaaatccgacaaaccggtagaagtagtgcctgcgaccgaaacagccccatta
acccaaccatcggctgaacctacagaaattgtagaaagcgattcagaccaaccaaaacgt
cacagaaatagacggggtcgtagtcgaaataaaaataataacaatcaggcatttgtacca
aatgaagttttgcttgagcagcaagatatattggcctctgaatcgattaaagagaattca
aaatctttagaattgtctcatgctactccaaatgcaattgcagaaccacttagtaataag
ggtgttccatctggagttgtctctgaggatgtacctcaagacgataaagttagacaaaat
attgaggcaccatctgtaagtgaaaccattgcggattttgatcctcagtctattggagca
gaagttgctccaaaacctcttcctcgcagtcagggtagaagacctgctgagcacaaacaa
tctgctatggatcgttctgatggtaggcaatctgctatggatcgttctgatggtagacaa
tctgctatggatcgttctgatgcggaaagcgtaggtaaggataacgttgaagctgatgac
tcaaagatttcacgaaaattggaaaattccaagtctgataggagtcctaaatccatagaa
aaatcagagcaaactgaacatgcagaaaataaatttagaattaccaaaaaagaagtaatt
caaaaatttgtttttaataaagaggagttgcttagtgtctgcgaaagcattggcatgact
tggattgaaactgatccatctaaaatcgttgaaatacctaaagttgacgttaaactaggt
cgcgaacgcaagcctctagtgccactttcaaacgaacccctagagcaggtagaaactaaa
attattaattag
DBGET
integrated database retrieval system
