Trichodesmium erythraeum: Tery_0618
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Entry
Tery_0618 CDS
T00387
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ter
Trichodesmium erythraeum
Pathway
ter03410
Base excision repair
ter03430
Mismatch repair
ter03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tery_0618
03430 Mismatch repair
Tery_0618
03440 Homologous recombination
Tery_0618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ter03400
]
Tery_0618
DNA repair and recombination proteins [BR:
ter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Tery_0618
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tery_0618
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Tery_0618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Ten1_2
Motif
Other DBs
NCBI-ProteinID:
ABG50061
UniProt:
Q118L3
LinkDB
All DBs
Position
1002049..1004481
Genome browser
AA seq
810 aa
AA seq
DB search
MSQEKKYWQILSSNHPPYSFIESFKSYVPELSGKYLAQLLWQRGIKNPEDIASFLDPKQY
KPASFSAFGSEINNAVARIISARNNQEKVAIWGDFDADGITSTSVLWDGLGEFLDKIDQL
TYYIPNRFTESHGLNFSGIERLAKKNYSLIITCDTGSTNIAEIEYANSLGIDIIVTDHHT
IPTKRPPLFAIINPRYFSQDHPLYNLSGVGVAYKLIEALYLTHPEIPQLPLTELLDLVAI
GLIADLVELRDDCRYLAQIGIEKLRTQLHKTTRPGVAKLLELCQKTGDRPTDISFGIGPR
INAVSRIMGEASFCVELLTSRNPQHCQKLALQTELANSRRKSLEKEVAKDIAQKLTKLDL
STTHVIVLSDPQWPVGVLGLVAGQIAQKYGRPTILFSEETEVTKTSEKKLLARGSARSVG
NINLYELVKNQAHLLHNFGGHPFAAGLSLPVENISIFTDAINQLLGEILGVTFNQTSVIE
VDLIITVSELGRDLFQELKLLEPCGMGNPVPKLLIQNCWFTDIWHQNQTDMEGNKVRYIK
TNFEICDKSIDKGFPGIWWGHYKEEIPEEICDAVLELDFNAKKKCYEARLIAVQPNSQDS
QVVASNTVNWILDWRNNSQPLFENKNSKFLNKNYSDTNESKLSLRENEKDLIVLTQCPTN
WNDLRIWFRRAINQQKKLAIAYSQPFITHPLQIWQQLLGIAKYLSRTGQPVTPDQLVKKL
SISDTTLKLGLIALQYFGFNVKYKDKYFYIIQSQSQNQKLETLSQTVQKFLAAVSEEQFR
EKYFCEVPLKIIEAIAIQTILEDANSSIPF
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaaaaaatattggcaaatcctgagttccaatcatccaccttattcattt
attgaatctttcaaaagctatgtaccagaattatcgggaaaatatctagcacaattatta
tggcaacgtggaattaaaaatcctgaagatatagcatcatttttagatccgaaacaatat
aaaccagctagtttttcagcatttggctcagaaattaataatgccgtagcaagaattatt
tctgctagaaataatcaagaaaaagttgctatctggggagattttgatgcagatgggatt
acgtcaacatctgtactatgggatggattaggagaatttttagataaaatagaccaacta
acttattatattcctaataggtttacagaatctcatggtttgaatttttctggaatagaa
aggttagctaaaaaaaattatagtttgataattacctgcgatacaggtagtacaaatatt
gccgaaatagaatatgcaaatagtttaggtatagatataattgttactgatcatcatact
attcccacaaaacgcccaccgttatttgctattattaatcctcgctatttttctcaagat
catcccctatataatttatctggagttggagtagcttataagcttatagaggcactttat
ttaactcatccggaaatacctcaacttcccctaacagaattattagatttagtagctatt
ggtttaattgcagatctagttgaactaagagatgactgtcgttatttagcacaaataggt
attgaaaaattaaggacacaattacacaaaactaccaggccaggagttgctaaactttta
gaattgtgccaaaaaacaggcgatcgccctacagatatttcttttggtattggccctcga
attaatgctgtaagtagaattatgggagaggccagtttttgtgtggaactattgacaagt
cgtaaccctcaacattgtcaaaaactagcgttacaaacagagttggctaactctaggcgc
aagtctctagaaaaagaagtagctaaagatattgcccaaaaattgacaaaactagacctt
tctacgactcatgtcatagttctgagtgatcctcaatggcctgttggtgtgctaggatta
gtggcaggccaaatagctcaaaagtatggtcgtcctactattttatttagtgaggaaact
gaagttactaaaacttctgaaaaaaaattattagctcgcggttctgcccgttctgttggt
aatataaatctttatgagttggtgaaaaatcaagcacatttgttacataattttggcggt
catccttttgctgctggtctgagtttaccagtagaaaatatttcaatatttacagatgct
attaatcagttattgggagaaatattaggggtcacttttaaccaaacctcagtaatagaa
gtagatttaattatcactgtatctgagttaggtagagatttatttcaagaactaaagctt
ttggaaccctgtggtatgggaaacccggtgcctaaacttttaattcaaaattgttggttt
actgatatttggcatcagaaccaaacagacatggagggaaataaagtcagatatattaaa
acaaattttgaaatttgcgataagtctatagataaagggtttcctggtatttggtggggt
cattataaggaagaaattcctgaagaaatatgtgatgctgttctagaattagatttcaat
gctaaaaaaaaatgttatgaagctcgacttattgctgtacaacccaattcccaagatagt
caagtcgtagcatcgaacaccgtaaattggatattagactggcgcaataatagtcaacct
ctttttgaaaataaaaactcaaagttcctaaataaaaattatagtgacacgaatgaatct
aagttatcccttcgcgaaaatgaaaaagacttaattgttcttacccaatgtcccacaaac
tggaatgatttacgcatctggttccgacgagcaataaatcaacaaaaaaaactagcgatc
gcttactcccaaccttttattacccaccctctacaaatctggcaacaacttctgggaatt
gccaaatatcttagccgtacaggtcaacctgtaactcctgatcaattggtaaaaaagtta
agtattagtgatactactcttaaattaggtttaatagcattacaatattttggatttaat
gtcaagtataaagataaatatttttacattattcagagtcaaagccaaaatcaaaaatta
gaaactttatcccaaacagtccaaaagttcctcgcagcagtatcagaagaacaatttagg
gaaaaatacttttgtgaagtgcccctaaaaataatagaagcgatcgcaattcaaacaatt
ttagaagatgctaatagttctattcccttctag
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