Trichodesmium erythraeum: Tery_0641
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Entry
Tery_0641 CDS
T00387
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ter
Trichodesmium erythraeum
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ter03016
]
Tery_0641
Enzymes [BR:
ter01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Tery_0641
Transfer RNA biogenesis [BR:
ter03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Tery_0641
Prokaryotic type
Tery_0641
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ABG50082
UniProt:
Q118J2
LinkDB
All DBs
Position
complement(1044189..1045154)
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AA seq
321 aa
AA seq
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MQITFLGTSSGVPTRSRNVSSIALRLPQRAELWLFDCGEGTQHQFLRSDLKVSQLSRIFI
THMHGDHVFGLMGLLASCGLGGNVKSVTLYGPPALEDYLQAGLRYSQTHLAYPIKVHKSK
PGVIYEDDEYVVSCAYLKHRVTAFGYRVTEKDRPGHFNVEKAKALGIPPGPIYRKLKQGE
FVTLPDGRKINGADLCGAPHVGRKFVYCTDTVFCDGAVELSQGADLLVHEATFSHQDAEM
AFQRLHSTSTMAAQVALAAGVKHLMMTHFSPRYAPGNSVLLDDLLQEARAIFPNTDMAYD
FLSYEIPRWNEVSQLLAKARS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
ttgcagataacttttctaggaactagttctggtgttccaacgcgatcacgtaatgtttca
agtattgctttacgtttacctcaaagggctgagttatggttgtttgattgtggtgaagga
actcaacatcagtttctccgtagtgatcttaaagtcagtcaacttagtcgtatttttatt
acccacatgcatggagaccatgtttttggtttgatggggttgttagctagttgtggttta
gggggaaatgttaaaagtgttactttatatggtccacctgctttagaggattatctccaa
gctggtcttcgatactctcaaactcatttagcttatccaattaaagttcataagagtaag
cctggtgtgatttatgaggatgatgagtatgttgttagttgtgcttatttgaagcatcgg
gttactgcttttggttatcgggtaacagaaaaggatcgaccaggacattttaatgtggaa
aaggcaaaggctttagggattcctcctggccctatctataggaagctgaaacagggtgag
tttgttactttgcctgatgggcggaaaattaatggggctgatttgtgtggcgcaccccat
gtcggccggaagtttgtttattgtactgatactgtgttttgtgatggggctgtggaattg
tcacagggggcagatttacttgttcacgaggctactttttctcatcaggatgctgaaatg
gcctttcaaagattgcattctacttcaactatggcggcacaggtggctttagctgcaggt
gttaagcatttgatgatgactcattttagtcctaggtatgctcctggaaattcggttttg
ttggatgatttgctgcaggaggcgcgggctatttttcctaatactgatatggcttatgat
tttctaagttatgagattcctagatggaatgaagtttcacagttgctagcaaaagctaga
tcttag
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