Trichodesmium erythraeum: Tery_1105
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Entry
Tery_1105 CDS
T00387
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ter
Trichodesmium erythraeum
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Tery_1105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ter03019
]
Tery_1105
03009 Ribosome biogenesis [BR:
ter03009
]
Tery_1105
03036 Chromosome and associated proteins [BR:
ter03036
]
Tery_1105
Enzymes [BR:
ter01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Tery_1105
Messenger RNA biogenesis [BR:
ter03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tery_1105
Ribosome biogenesis [BR:
ter03009
]
Eukaryotic type
90S particles
RNase
Tery_1105
Prokaryotic type
rRNA processing factors
Tery_1105
Chromosome and associated proteins [BR:
ter03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Tery_1105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_2
DUF7071
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
ABG50470
UniProt:
Q116V4
LinkDB
All DBs
Position
complement(1739339..1740091)
Genome browser
AA seq
250 aa
AA seq
DB search
MTQMYHSRQRQLKSLVEKLSISQQALIKWNLLDLALTHSTVSSTHNNEKLEFFGDAVVRL
VAAQLLLENYPNCSVGEFTAIRSILVSDRSLAQIADKYGWSRYLLVSKSAAGDKVGRERR
LADSFEAVLGALYLSTNNLELIRPWLDSHFERLIAEIRKDPACHSYKAALQELTQGYYKT
LPNYQAHEVNKIYGDRERFFAEVWFKGQKLGVGKGPSIKAAEEAAAKSALDFLQQSGIQN
IIKEEKDKKE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaatgtatcattcgcgccaaaggcaacttaaatctttagttgaaaaattatct
atttctcaacaagctttgattaaatggaatttattagatttggcattaactcactctaca
gtttcatcaacacataataatgaaaagctagagttttttggggatgcagtggtacggctt
gtggcggcacaactactgttggaaaattatcctaattgttcagtaggagaatttactgcc
attcgttctattttagtaagcgatcgctctttggcacaaattgccgataagtatgggtgg
agtcgttatttattggtatccaaaagtgcagcaggggataaagttggaagagagcgtcga
cttgcagattcttttgaggctgttttgggtgctctttatttgagtactaataatttagag
ttgatccgcccttggttagattctcattttgaaaggttaatagcagaaattcgcaaggat
cccgcttgccacagttataaggctgctctccaagagctgactcaaggttattacaaaacg
ttaccaaattatcaagctcacgaagtaaataagatttatggcgatcgcgaacgtttcttt
gccgaagtttggtttaaaggccagaaacttggtgtaggtaaaggaccatctattaaggcc
gcagaggaagcggctgctaaatctgctttagattttttgcagcagtcgggaatacaaaat
attatcaaagaggaaaaggataaaaaggaatga
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