Trichodesmium erythraeum: Tery_1293
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Entry
Tery_1293 CDS
T00387
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ter
Trichodesmium erythraeum
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ter03009
]
Tery_1293
Enzymes [BR:
ter01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Tery_1293
Ribosome biogenesis [BR:
ter03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Tery_1293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ABG50624
UniProt:
Q116F0
LinkDB
All DBs
Position
1973698..1974462
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AA seq
254 aa
AA seq
DB search
MDERLQKILSQWGIASRRQAEQMIIAGRVKVNGKIVQLGEKAQPDLDNIEVDGLPIRPEA
RPSPIYLLLNKPMGVISTCSEPRKRSKVLDILNAELRNGKGIHPVGRLDADSTGALLLTN
DGRVTYCLTHPKYCLSKTYQVLVEGHPQESILKLWRQGIILSGKKTLPAEVKVLKECNSS
QTLLEVVISEGRNRQIRRVADKLGHRVLKLHRTAIGQIKLQLPGESVLPIGHYRQLKDFE
IEFLDDQIIESKFS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagattacaaaaaatattatctcagtggggcatagcatctcggcgtcaagct
gaacaaatgatcatagcgggacgagtaaaggttaatggtaaaattgtccaattaggagaa
aaggctcaaccagacttggacaatattgaagtggatggtttgcccattagacccgaagct
cgaccatcacccatatatttattgttaaataaacctatgggagtaatttcaacttgttcg
gaacctaggaaacgtagtaaagttttagatatcctaaacgcagaactacgaaatggaaaa
ggtattcatcctgtaggacgtttagatgcagactctacaggagcattactcctcacaaat
gatggtcgggtgacttattgtttaacccaccccaaatattgtctttctaaaacctatcaa
gttttggtagaaggtcatccccaagaatcaatcttaaagttgtggcgtcaaggtattatt
ttatctggtaaaaaaactttacccgctgaggttaaagtcttaaaagaatgtaatagttct
caaactcttttagaagtggtcatctctgaaggcagaaatcgccagattcgtagagttgca
gataaattgggacatcgtgtacttaaactacaccgtactgcaattggtcaaattaagttg
cagttgcctggagagtcagttttacctattggccattatagacaattaaaggattttgaa
attgagtttttggatgaccaaattattgaatctaaattcagctaa
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