Trichodesmium erythraeum: Tery_1365
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Entry
Tery_1365 CDS
T00387
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ter
Trichodesmium erythraeum
Pathway
ter03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tery_1365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ter03400
]
Tery_1365
Enzymes [BR:
ter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tery_1365
DNA repair and recombination proteins [BR:
ter03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tery_1365
RecFOR pathway proteins
Tery_1365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_3
nSTAND3
AAA_16
AAA_14
AAA_22
TIP49
Sigma54_activ_2
Rad17
AAA_25
Bac_DnaA
RNA_helicase
TsaE
AAA_18
NPHP3_N
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ABG50677
UniProt:
Q115Z7
LinkDB
All DBs
Position
2093317..2094477
Genome browser
AA seq
386 aa
AA seq
DB search
MAIISSKKQSPQPERPDDDIFLASENQVSYKYKTKKSKSQAQRSEVEALLEPEASAAEKS
DNQNEEKIRPQRLDEYIGQKDLKEVLNIAISAAKSRKESLDHLLLYGPPGLGKTTMSLIL
AAEMEVNCKITTAPAIEKPRDIVGLLVGLQKGDILFIDEIHRLSKMTEEILYPAMEDFRL
DITVGQGKSSKTRSIPLKPFTLVGATTKVGSLTSPLRDRFGIIQRLRFYEVDELSLIIIR
AAKVLNTDITEDGAEEVARRSRGTPRIANRLLRRVRDYSEVKKLTPINAEIAGEALELFN
VDPLGLDWTDRNLLRTMIENYNGGPAGLETMAAATGEDAQTIEEVYEPYLMQIGFMQRTP
RGRVVTAAGWRHLGFSPPDEQLSLKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggccataatttcttctaaaaaacaatctcctcaaccagaaaggccagatgatgacatt
ttcttagcctcagaaaatcaagtttcatataaatataaaacgaaaaaatcaaagtctcaa
gctcaaagatcggaagtagaagctttattagaaccagaggcatctgctgcagaaaaaagt
gataatcaaaatgaggaaaaaatccgacctcaaaggttagatgaatatatcggacagaaa
gacctaaaagaggtgttgaatattgcgatttcggcggctaaatctagaaaagaatctcta
gaccatttactattgtatggtcctccaggattggggaagactactatgtctctaatattg
gcagcagaaatggaggttaattgtaagattacaactgcacctgctattgaaaaacctaga
gatatagttggtttgttagtaggtttacaaaaaggggatattttgtttatagatgaaatt
catcgcctttctaaaatgaccgaagaaatactttatccggcgatggaagattttcgacta
gatattacggttgggcaaggtaagagctctaagactaggagtattcctctcaaacctttt
actttggtaggagcaactactaaagtgggttctttgacttctcctctacgcgatcgcttc
ggaattattcagaggttacggttttatgaggttgatgaactgagtttaattattatccga
gcagcaaaagtcttaaatacggatattacagaggatggtgctgaggaggttgcccgtcgt
tccaggggtacgcctcgaattgctaatcgtttattgagaagagtgagagattattcggag
gtgaaaaagttgactccgataaatgctgagattgcaggtgaagctttggagttgtttaat
gttgaccctcttggtttagattggactgaccgtaatttattgaggactatgattgagaat
tataatggtggtcctgctggtttggagactatggctgcagcaactggggaggatgctcaa
actattgaggaggtttatgagccgtatttgatgcagattggatttatgcagcgtactcct
cgtggtcgagttgtgactgcggctggttggaggcatttgggttttagtccgccggatgag
cagttgagtttgaagttgtag
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