Trichodesmium erythraeum: Tery_1889
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Entry
Tery_1889 CDS
T00387
Name
(GenBank) DNA polymerase III, alpha subunit / Intein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ter
Trichodesmium erythraeum
Pathway
ter03030
DNA replication
ter03430
Mismatch repair
ter03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tery_1889
03430 Mismatch repair
Tery_1889
03440 Homologous recombination
Tery_1889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ter03032
]
Tery_1889
03400 DNA repair and recombination proteins [BR:
ter03400
]
Tery_1889
Enzymes [BR:
ter01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tery_1889
DNA replication proteins [BR:
ter03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tery_1889
DNA repair and recombination proteins [BR:
ter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tery_1889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
Intein_splicing
LAGLIDADG_3
PT-HINT
Motif
Other DBs
NCBI-ProteinID:
ABG51145
UniProt:
Q114C9
LinkDB
All DBs
Position
2888237..2896291
Genome browser
AA seq
2684 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLPQLIDRAVELGMPAIALTDHGVMYGAIQLIKLCRNKNIK
PIIGNEMYVIKGDIEKQQRGKKFHQVVLAKNTQGYKNLVKLTTLSHLHGFQGKGIFARPC
INKELLEKYHEGLIVTSGCLAGEVPQNIMRGELEEAKKIAKWYKDLFGEDYYLEIQDHGF
QEDRVVNTGIVTIAKKLKIKIVATNDSHFISCRDVEAHDALLCINTQKLIAEEKRMRYSG
TEYLKSAEEMKQLFRDHLENEVIEEAIANTLEVANKVKAYEGILGEPRIPDYPIPPDHNA
DTYLEKLAWSGLLERLKLKQKSEISPIYKERMETELKVLQDKGFSTYFLVVWDYIKYARD
NNIPVGPGRGSAAGSLVAYSLRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIENRDV
MIKYVTQRYGEERVAQIITFNRMTSKAVLKDVGRVLGISFGEANKMAKLIPVARGKPAKL
KVMISDETPSPEFKKAYDNQETPIEDNKAGKISTISVRQWIDMAIRIEGTNKTFGVHAAG
VVISKEPLDEIVPLQRNNDGSVITQYHMEDIESLGLLKMDFLGLKNLTIIQNTAELIKKN
HHLPLVPDDLPANERKAIEILAKGNTKKMPEDVKKTYDLIKSGDLEGVFQLESSGMVDVV
KKLKPTSIEDISSILALYRPGPLDAGLIPKFIDRKHGSEKIEYQHPKLEPILKETYGVLC
LPKGTLIDQPDGSREAIENIKSGEVILTSDGRKVWEAKVAKQWRSGVREILKITLSSGTV
IYSGKNHRFLTPEGDKFAWELQPQVGRVKNALIYGSAVYEKWQVSSNQKQLRKNDAYLLG
LLVGKSNLISSTPNVSFSTQGAITWGKNLIDETWGGEAKHYFDTSRRQVYLNFNTQSKPT
ALTEFLDGIYGAQNWQVESVAKHLPEDILDYSEKDRIDLLRGLWDSGGFDGKKLLYYPGS
SPQLLSQVCQLLGSLKIDYYLADNSVRISDRSRFIDILENYQMSSQQKEEISESYLPASS
WFLKGGSENNIQKTDSSSRKTGEASQQKATLFTQNLFSAQTPAENWEKVGENHLLSSWFL
TDASENNIQKTDSSSRKTGEASQQKATLFTQNLFSAQTPAENWEKVRENHLLSSWFLTNA
SEIYLQRIDSSSRKTGEASQQKATLFTQNLFSVQTPAENWEKVRENHLLSSWFLTDASEN
NIQKTDSSSRKTGEASQQKATLFTQNLFSAQTPAENWEKVRENHLLSSWFLTNASENNIQ
KTDSSSRKTGEASQQKATLFTQNLFSAQTPAENWKKSRKNHLPSSWFLKGGSENNIQKTD
SSSRKTGEASQQKATLFTQNLFSAQTPAENWEKVRENHLLSSWFLKDASENNIQKTDSSS
RKTGEASQQKATLFTQNLFSAQTPAENWEKVRENHLLSSWFLTDASENNIQKTDSSSRKT
GEASQQKATLFTQNLFSAQTPAENWEKVRENHLLSSWFLTDASENNIQKTDSSSRKTGEA
SQQKATLFTQNLFSAQTPAENWEKVRENHLLSSWFLTNASENNIQKTDSSSRKTGEASQQ
KATLFTQNLFSAQTPAENWKKARENHLLSSWFLTNASEIYLQRTDSSSRKTGEASQQKAT
LFTQNLFSVQTPAENWKKARENHLLSSWFLTNASEIYLQRTDSSSRKTGGASQQKATLFN
QNLFSVQTPAENWEKVRENYLLSSWFLTNASEIYLQRTDSSSRKTGEASQQKATLFTQNL
FSVQTPAENWKKARENHLLSSWFLTNASEIYLQRTDSSSRKTGGASQQKATLFNQNLFSV
QTPAENWKKARENHLLSSWFLTNASEIYLQRTDSSSRKTVEASQQKATLFTQNLFSAQTP
AENWEKVRENYLLSSWFLTNASEIYLQRIDSSSRKTGEACQQKATLFNQNLFSAQTPAEN
WKKVRENHLLSSWFLTDASENNIQKTDSSSRKTVEASQQKATLFTQNLFSAQTPAENWKK
SRKNHLPSSWFLTDASENNIQKTDSSSRKTGEASQQKATLFTQNLFSVQTPELENWECEK
TYLQDVRVVHVVSVEEVGEAECFDLEMEDQSSPYFLAEGVVVHNCYQEQIMKMAQDLAGY
SLGEADLLRRCLSGSTKVIDAATGNLFSLKEIAAQPEYWLSRKVFSLDLKSQQVVQQPIT
EIHPNGVRDVWQITTRTNRKVCATDDHLFYTVLGWKPLKDFSVGDRLGLPNKIPINYRSQ
ISDSKVKFTAYLIGEGYLYTNSFSCSYFCNSDGELIADFYGCAEELFGSSAPIEKQLHLG
NKSVIYVRIGLISGLKNWVDSYLQCANSRVQEIPNWIFSLSQSQLQLFLGILWSTSGIFD
ETIGYTYYSSNSEVLVRQVQHLFLRLGIVSLFNVNKVKGQGELDVSYVVEVRGREDMLKF
YKLIKPYLSSYKQGLCESCYLVIKYQQSYQFKYFLTPDFFDLIVKAKKASSMTRALGVCG
GEISSVWNFQNTSNRSLSFDKFNNFSTVLADEELTAIANSDVFWDEIISIEYIGKEEVFD
LTIPETHNFIANDFIVHNCMGKKKVSEMEKHREKFIDGAAQRGVSSVVAKDLFEQMIKFA
EYCLTYETEIMTVEYGPLPIGKIVEYRIECTVYTVDKNGYIYTQPIAQWHNRGMQEVYEY
SLEDGTVIRATPEHKFMTEDGQMLPIDEIFERNLDLKCLGTLEL
NT seq
8055 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgttggcctacatattcatagcgactatagcctattagacggagcatctcaa
ttaccacaattaatagatagagcagtagaactaggaatgccagccattgccctgacagac
cacggagttatgtatggggctattcaattaattaaactgtgtagaaacaaaaatattaaa
cccataattgggaatgaaatgtatgtgataaaaggagatattgagaaacaacaaagaggg
aaaaaatttcatcaggtcgtattagcaaaaaatactcaaggctataaaaatttagtcaaa
ttaacaactctttctcatctccatggttttcaaggaaaaggtatatttgctcggccttgt
attaataaagaattgttagaaaaatatcacgaaggtctcatagtaactagcgggtgtttg
gcgggagaagtacctcaaaatattatgcggggagaattagaagaagccaagaaaatagct
aaatggtacaaagatttatttggggaagattattatctagaaatacaagaccatggcttc
caggaagatagagttgtaaatactggaattgtcacaattgctaaaaaattaaagataaaa
atagtagcaacaaacgactctcattttatttcttgtagagatgtagaagcacacgacgct
ttgttgtgtattaacactcaaaaattaattgctgaagaaaagcggatgcgctatagtggc
accgaatatttaaagtctgctgaagaaatgaagcaactgtttagagaccacttagaaaat
gaagttatagaagaggcgatcgctaatacattagaagtagcaaataaagttaaagcttat
gaaggaattttaggagaaccaagaattcctgattatccaattccaccagatcataatgct
gatacttacctggaaaaactagcttggtcaggattattagaaaggctaaaactgaaacaa
aaaagtgaaatttccccaatttataaagagcggatggaaactgaattaaaagttcttcag
gataaaggtttttctacatattttttggtagtttgggattatataaaatatgccagagat
aataatattcctgtaggacctggtaggggaagtgctgctggttcattagttgcctattct
ttgcgaattactaatatagatccggtgcatcatggtttattatttgaaagatttttaaat
ccagaacgaaaatcaatgccagatattgatacggacttctgtattgaaaaccgagatgta
atgattaaatatgtgactcaaaggtatggagaagaaagagtcgctcaaattattactttt
aaccggatgacatctaaggcagtattaaaagatgtgggtagagtattaggtatttccttt
ggagaagcaaataaaatggcaaagttaattcctgttgcacggggtaaaccagcaaagtta
aaagtaatgatttctgatgaaactccttccccagaatttaaaaaagcttatgataaccaa
gaaacaccaattgaagataataaagcgggaaaaattagtacaatttctgtccgacaatgg
atagatatggcaattagaattgagggtacaaataaaacttttggagtacacgcagcagga
gtagtaatttctaaagaacctctggatgaaattgtgcctttgcaaagaaataatgatggg
tcagttattactcagtatcatatggaggatatagaatctctaggtttgttgaagatggat
tttttgggattgaaaaacttgactattatccagaatactgccgagttaattaaaaaaaat
catcatcttccgttggttccagatgatttaccagctaatgaaagaaaggcaatagaaatt
ttagcaaaaggcaatactaagaaaatgccagaggatgtgaaaaagacttatgacttgatt
aaatctggagatttagaaggagtatttcagttggaatcttctgggatggtagatgtagtg
aaaaaattgaagcctacttctattgaggatatttcttctatcttagctttgtatcgcccc
ggacctttggatgctggtttaattcctaagtttattgacaggaaacatggcagcgaaaaa
attgaatatcaacatccaaagttagagccaattttaaaagaaacttatggggttttgtgt
ttaccaaagggaactttaattgatcaaccagatggttcccgggaagcaattgaaaatatt
aaaagtggagaggtaattttaacttcggacggtagaaaagtttgggaggcaaaagttgct
aaacaatggcggagtggtgttagggaaatattgaagattactttgtctagcgggacggta
atttattcgggaaaaaaccatcgctttttaactccagaaggagataagtttgcctgggag
ttacaacctcaagtggggagagttaagaacgctcttatttatggttctgcggtttatgaa
aaatggcaagtttctagtaatcagaaacaactccgtaaaaacgatgcttatttgttaggg
ttattagtaggaaagagtaatctgatttcctcaactcccaatgtttccttttccacacaa
ggggctattacttgggggaaaaatttgattgatgaaacttggggtggggaagctaaacat
tattttgatacttctcgccgacaggtttatttaaactttaatactcaatccaaacctaca
gccctaaccgagtttttggatggtatttatggcgctcaaaattggcaggtagaatctgtt
gccaagcatttaccagaagatattttagattattcggaaaaagaccgaatagatttattg
cgtggtctctgggatagtggtggttttgatggcaaaaagttgctttattatccaggttct
tctcctcaattattgtcacaagtttgccagcttttgggaagtttaaaaattgattattat
ctggcagataattctgttaggatttccgataggtctcggtttattgatatattggaaaac
taccaaatgtctagccaacaaaaagaagaaattagcgaaagttatttacctgcttcctct
tggtttttgaaaggtggttctgaaaataatattcagaaaacagatagttcgagtcggaaa
actggggaggcttcccagcagaaagcaactttatttacccagaatttattctcggctcaa
actccggcagaaaattgggaaaaagtcggagaaaatcatctactttcctcttggtttttg
acagatgcttctgaaaataatattcagaaaacagatagttcgagtcggaaaactggggag
gcttctcagcagaaagcaactttatttacccagaatttattctcggctcaaactccggca
gaaaattgggaaaaagtcagagaaaatcatctactttcctcttggtttttgacaaatgct
tctgaaatttatcttcagagaatagatagttcgagtcggaaaactggggaggcttctcag
cagaaagcaactttatttacccagaatttattctcggttcaaactccggcagaaaattgg
gaaaaagtcagagaaaatcatctactttcctcttggtttttgacagatgcttctgaaaat
aatattcagaaaacagatagttcgagtcggaaaactggggaggcttctcagcagaaagca
actttatttacccagaatttattctcggctcaaactccggcagaaaattgggaaaaagtc
agagaaaatcatctactttcctcttggtttttgacaaatgcttctgaaaataatattcag
aaaacagatagttcgagtcggaaaactggggaggcttcccagcagaaagcaactttattt
acccagaatttattctcggctcaaactccggcagaaaattggaaaaaatccagaaaaaat
catctaccttcctcttggtttttgaaaggtggttctgaaaataatattcagaaaacagat
agttcgagtcggaaaactggggaggcttctcagcagaaagcaactttatttacccagaat
ttattctcggctcaaactccggcagaaaattgggaaaaagtcagagaaaatcatctactt
tcctcttggtttttgaaagatgcttctgaaaataatattcagaaaacagatagttcgagt
cggaaaactggggaggcttctcagcagaaagcaactttatttacccagaatttattctcg
gctcaaactccggcagaaaattgggaaaaagtcagagaaaatcatctactttcctcttgg
tttttgacagatgcttctgaaaataatattcagaaaacagatagttcgagtcggaaaact
ggggaggcttctcagcagaaagcaactttatttacccagaatttattctcggctcaaact
ccggcagaaaattgggaaaaagtcagagaaaatcatctactttcctcttggtttttgaca
gatgcttctgaaaataatattcagaaaacagatagttcgagtcggaaaactggggaggct
tcccagcagaaagcaactttatttacccagaatttattctcggctcaaactccggcagaa
aattgggaaaaagtcagagaaaatcatctactttcctcttggtttttgacaaatgcttct
gaaaataatattcagaaaacagatagttcgagtcggaaaactggggaggcttcccagcag
aaagcaactttatttacccagaatttattctcggctcaaactccggcagaaaattggaaa
aaagccagagaaaatcatctactttcctcttggtttttgacaaatgcttctgaaatttat
cttcagagaacagatagttcgagtcggaaaactggggaggcttcccagcagaaagcaact
ttatttacccagaatttattctcggttcaaactccggcagaaaattggaaaaaagccaga
gaaaatcatctactttcctcttggtttttgacaaatgcttctgaaatttatcttcagaga
acagatagttcgagtcggaaaactgggggggcttcccagcagaaagcaactttatttaac
cagaatttattctcggttcaaactccggcagaaaattgggaaaaagtcagagaaaattat
ctactttcctcttggtttttgacaaatgcttctgaaatttatcttcagagaacagatagt
tcgagtcggaaaactggggaggcttcccagcagaaagcaactttatttacccagaattta
ttctcggttcaaactccggcagaaaattggaaaaaagccagagaaaatcatctactttcc
tcttggtttttgacaaatgcttctgaaatttatcttcagagaacagatagttcgagtcgg
aaaactgggggggcttcccagcagaaagcaactttatttaaccagaatttattctcggtt
caaactccggcagaaaattggaaaaaagccagagaaaatcatctactttcctcttggttt
ttgacaaatgcttctgaaatttatcttcagagaacagatagttcgagtcggaaaactgtg
gaggcttcccagcagaaagcaactttatttacccagaatttattctcggctcaaactccg
gcagaaaattgggaaaaagtcagagaaaattatctactttcctcttggtttttgacaaat
gcttctgaaatttatcttcagagaatagatagttcgagtcggaaaactggggaggcttgc
cagcagaaagcaactttatttaaccagaatttattctcggctcaaactccggcagaaaat
tggaaaaaagtcagagaaaatcatctactttcctcttggtttttgacagatgcttctgaa
aataatattcagaaaacagatagttcgagtcggaaaactgtggaggcttcccagcagaaa
gcaactttatttacccagaatttattctcggctcaaactccggcagaaaattggaaaaaa
tccagaaaaaatcatctaccttcctcttggtttttgacagatgcttctgaaaataatatt
cagaaaacagatagttcgagtcggaaaactggggaggcttcccagcagaaagcaacttta
tttacccagaatttattctcggttcaaactccagagttggaaaattgggaatgtgaaaaa
acttatttacaggatgtcagagttgttcatgttgtctctgtggaagaagtaggagaagca
gaatgttttgatttagaaatggaagaccaaagctcaccttattttctagctgaaggagta
gtagttcataattgttatcaagagcaaattatgaaaatggctcaagatttagcaggatat
tctttgggagaagcagatttattacgtcgttgtttaagtggttcgacaaaagtaatagat
gcagcaacaggtaacttgtttagtctgaaagaaatagctgctcaacctgagtattggttg
agtcgaaaagtcttttctttagatctcaaaagccaacaagttgttcaacaaccaataaca
gaaattcatcctaatggtgtgcgagatgtttggcaaattactactcgtacaaaccggaaa
gtttgcgctacggatgaccaccttttttatacagttttaggatggaaacctttaaaagat
ttttctgtaggcgatcgcttaggtttaccaaataaaattccgattaattataggagtcaa
atatctgattctaaagttaaatttactgcttatttaattggtgaaggatatctatatact
aatagtttttcttgtagttatttctgtaatagtgatggggaattaattgctgatttttat
ggttgtgcagaggagttatttggctcttctgctcctattgaaaaacagctacatctagga
aataaatcagttatttatgttcgtataggtttgatttcagggttgaagaattgggttgat
agttatcttcaatgtgctaattcacgggttcaagaaattcctaattggatcttttctctt
tctcagagtcagttacaacttttcttgggaattttatggtcaacaagtggtatttttgac
gaaacaattgggtatacatattattcttcaaattcagaggttttagttagacaagttcaa
catttatttctacgtttaggtattgtttctctattcaatgttaataaggttaaaggtcaa
ggtgaacttgatgtttcttatgtggttgaagttagagggcgtgaggatatgctcaagttt
tataagttaattaagccatatttgagtagttacaaacaggggctttgtgaaagttgttat
ttagtgattaaatatcagcaaagttatcaatttaaatattttctaactccagattttttt
gacctaattgtcaaagctaaaaaagctagttctatgactagggctttgggtgtatgtggt
ggtgaaatttcatcggtttggaattttcaaaatacttcaaaccggagtttatcctttgat
aaatttaataatttttcgacagttttggcagatgaggaattaacggcaatagctaattct
gatgttttttgggatgagattatctctatagaatatattggcaaagaagaagtttttgat
ttaacaattcccgaaactcataattttattgctaatgattttattgttcacaactgcatg
ggtaaaaagaaggtctccgaaatggaaaaacaccgggaaaagtttattgatggtgcagct
caaaggggagtttcgtctgtagttgcaaaagatttgtttgaacagatgattaagtttgct
gaatattgtttaacttatgagactgaaattatgactgtagaatatggtcctcttcctatt
ggtaaaattgtagaatatcggattgaatgtacggtttatacggttgataaaaatggatat
atttatactcagccaattgctcaatggcataatcgaggtatgcaggaagtttatgaatat
agccttgaagatggaacagttattcgggcaactccagaacataagtttatgacagaagat
ggtcaaatgttgcctattgatgaaatttttgagcgtaatttggatttaaaatgtttaggg
actcttgaactatga
DBGET
integrated database retrieval system
