Trichodesmium erythraeum: Tery_1901
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Entry
Tery_1901 CDS
T00387
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ter
Trichodesmium erythraeum
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ter03032
]
Tery_1901
03400 DNA repair and recombination proteins [BR:
ter03400
]
Tery_1901
Enzymes [BR:
ter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Tery_1901
DNA replication proteins [BR:
ter03032
]
Prokaryotic type
DNA Topoisomerases
Tery_1901
DNA repair and recombination proteins [BR:
ter03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tery_1901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Phage_Nu1
Scaffolding_pro
BrxB
Plectin_PPL
Motif
Other DBs
NCBI-ProteinID:
ABG51156
UniProt:
Q114B8
LinkDB
All DBs
Position
complement(2928042..2930663)
Genome browser
AA seq
873 aa
AA seq
DB search
MAKKLNLLSGKVITTSLHTEMQQSYLEYAMSVIVGRALPDVRDGQKPVHRRIIYAMHELG
LTPDRPFRKCARVVGDVLGKYHPHGDQAVYDAMVRMIQNFSSRYPLLDGHGNFGSIDNDP
AAAMRYTESRLASIGNEGLLTQISEAIVDFTNNFDGSQQEPKVLPAQLPFLLLNGSSGIA
VGMATNVPPHNLGEVVDGLIALIDNPNISDQKLFELIPGPDFPTGGEIVSTDGIIDTYTK
GRGSIPMRGVATIEQVPTGRGRRTKTAIVVTELPFQVNKAGWIEKTADLVNAGKIEGIAD
LRDESDRSGIRVVIELKREADPSVVLHHLYRNTDLLSKFGAIMLALVNGQPQQLSLRTLL
QEFLNFREETLTRHYTHELQIAQARSHIVAGLLTALKELDRVIDILRNAPDGNTAKVSFQ
ESLGLSENQADAILAMPMRRLTGLEKQKLEEEHEQLMGKIQELENLLGDRHQLLKALKKE
LRTLKRKYNDPRRTRIIDQIKLKNADDFASISQQKKYLEAGNKEIDIKTKGRVIKSKNIT
VKSPILTLEAAPPPTEKVVIEFSHRGYVRRIPAKGFEKYKIDKKSHITMENSEDFTTNII
EATTDKTLVLLTRTGKAYPLKVNNIPSASNRSTIRNENKGVPLVTLLPPSATKEITDARK
EIIIGQFILNEAKENKDLIMLTQNGKIKRLCLSDLSDMRNRGVTVIKLKEDDELRYVSLG
KTGEQVVLATSGGRLLRLQIDDEKLPLMGRAAQGSQATRLRKQEELVGCVTLDIGSNLLL
VSQHSYGKQIPVTALRVANRGGIGQNVFQFTRQDDILAGIVASSSNVLVQVLTTDGRVFG
MIADRVKVDQQDDHGHRLLKLGAKEKIIKVVGY
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaattaaatttactttccggaaaagttattactacatcactccatacagaa
atgcaacaatcatatcttgaatatgccatgagtgtgattgttggccgagctttgccagat
gttagagatggacaaaaaccagttcatcgtcgaataatatacgctatgcacgaacttggt
ctcactccagatagaccatttcgcaaatgcgccagagtagttggtgacgttctcggaaaa
taccatccccacggcgaccaggctgtttatgatgctatggtgcggatgattcaaaatttt
tctagtcgttatccattactagatggccacggtaactttggctccattgacaatgaccct
gccgctgctatgcgttacacagaaagtcgcttggcatcaattggcaatgaaggtttatta
acccaaattagtgaagctatagttgactttaccaacaactttgatggttcccaacaagag
cctaaagtattaccggcacaattaccatttttattactaaatggttcttctggaattgct
gtaggaatggcaactaatgttccaccgcataatttaggtgaggtcgtagatggcctcatt
gctttaattgacaatcctaatatttctgatcaaaagttatttgaattaattcctgggcct
gactttcccactggaggagaaattgttagcacagatggaattattgatacttatactaag
ggtcgaggtagcatccccatgaggggtgtggcaactattgagcaagtgcctacaggtcgt
ggacgacggacaaaaacagctattgtggtcacagagttacctttccaagttaataaagca
ggctggatagaaaaaacagcagacttagttaatgcaggcaagatcgaaggtattgctgat
ttgcgagatgagagcgatcgctctggtattagagttgttattgagctaaaacgtgaagct
gaccctagtgttgtacttcaccatctctaccgaaatactgacttactttctaaatttggt
gcaattatgctagctttggttaatggacaaccacagcaattatctttgcgaacactttta
caagaatttctcaattttagagaagagactctcacccgtcactatacccatgagctacaa
atagctcaagctagaagtcacattgttgcaggtttactaactgctctaaaagaattggat
agagtaattgatattctcagaaatgcaccggatggtaatactgctaaagttagcttccaa
gaaagtttgggtttaagcgaaaatcaagctgatgctatcctagcaatgccaatgcgaaga
ctaactggtttggaaaaacaaaagttagaggaagaacatgagcaactcatgggaaaaata
caagagctagaaaatttattaggcgatcgccatcaacttctcaaagccctcaaaaaagaa
ttgcgaaccctaaagcgtaaatataacgaccctagacgtactcgaattatcgaccaaata
aaattaaaaaatgctgatgattttgcatctatttctcaacagaaaaaatatctagaagct
ggaaataaagaaatagatataaaaacaaaaggtagagtaataaaatcaaaaaatataaca
gttaaatcgccaattttgactttggaagctgctccgccacctacagaaaaagttgttata
gaatttagccaccgaggatatgtaagacgaattcctgctaaaggatttgagaagtataaa
attgataaaaaatctcatataactatggaaaatagtgaggattttactactaatataatt
gaggcaactactgacaaaactttagtattactaactcgtactggtaaagcatatcctttg
aaagtcaataatattccttctgcttctaaccgttcgacaatacggaatgaaaataaaggg
gtacctttagtaactttactacccccatcagctacaaaagaaattactgatgctcgtaaa
gaaattattattggtcaatttattttaaatgaagctaaggagaataaagacttaattatg
ttgactcaaaatggcaaaattaaacgtttatgtttgtctgatttgagtgatatgagaaat
cgtggagtgacagtaattaagcttaaagaagatgatgaattacgttatgttagtttgggt
aaaactggagaacaagtggttttggctacttctggtgggcgattattaagattacaaata
gatgacgaaaaattaccattaatggggcgtgctgctcaaggttctcaagcaactaggtta
aggaaacaagaagagttagttggttgtgtgactttggatataggaagtaatttattgtta
gtttctcaacacagttatggtaagcaaattcctgttactgctttgcgagtagctaatcgt
ggtggtattggtcaaaatgtttttcagtttaccagacaagatgatattttagcggggata
gttgctagtagttcaaatgttctggttcaggtgttgacaactgatggtagagtttttgga
atgattgctgacagggtaaaagttgatcaacaagatgatcacggccatcgtctactgaag
ttgggtgccaaagaaaaaattattaaagtggttggttattaa
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