Trichodesmium erythraeum: Tery_1905
Help
Entry
Tery_1905 CDS
T00387
Name
(GenBank) DNA polymerase III, alpha subunit / Intein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ter
Trichodesmium erythraeum
Pathway
ter03030
DNA replication
ter03430
Mismatch repair
ter03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tery_1905
03430 Mismatch repair
Tery_1905
03440 Homologous recombination
Tery_1905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ter03032
]
Tery_1905
03400 DNA repair and recombination proteins [BR:
ter03400
]
Tery_1905
Enzymes [BR:
ter01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tery_1905
DNA replication proteins [BR:
ter03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tery_1905
DNA repair and recombination proteins [BR:
ter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tery_1905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
HROB
Intein_splicing
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ABG51160
UniProt:
Q114B4
LinkDB
All DBs
Position
complement(2939721..2941274)
Genome browser
AA seq
517 aa
AA seq
DB search
MVKIVSRKLAKTENVYDIGVTKDHNFVLANGLIASNCFNKSHSTAYAYVAYQTAYLKANY
SLEYMAALLTANSGDQDKVQKYLANCQKFNIEVEPPNINQSEVDFTPLPKVATKEIKDKI
LVGLSAVKNVGEGAIEAILKARKEGGEFKSLADLCDRVNLNALNSRTLESLIKCGAFDKI
EANRHQLIKDLEGVMKWAQDRNKDRNIGQLSLFDNHIPGAKNSAFDSVPKSSPVSDFPAK
EKLEYEKEILGFYVSDHPLKYAQEQNQIQDAISIAQMKEKKSNSKIKLVVMLAGIKPHVT
KKGDPMAFIQVEDMTGQLDAVVFPKVYQEIKELLTENSLLVLKGKVDNKDDESQLLVESA
ETIEKVMADAVKQEEKPVTELDNYQNESRDEEIKKYQDIGKAEKPVEQLETQRNLRKTEL
SKTENSSAKQRQIIILELSVDKIPEDNSLFEQIQAILKEQSSGDEEKAKVAVGTLIFDDQ
RQQLVQFGREFWVEDGQTTINRFIGIGIEAKIIPFPY
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaaattgtctctcgcaaacttgccaaaacagaaaatgtttatgacattggtgta
actaaagaccataattttgtattagcaaacgggttaattgcttccaactgttttaataaa
tctcattccacagcttacgcttatgtagcttatcaaactgcttatttaaaagctaattat
tcactcgaatatatggcagctttactaaccgcaaatagtggcgaccaagataaagtacaa
aaatatcttgctaattgtcagaaatttaatatcgaagtcgaaccaccaaatattaatcag
tcagaagtagactttactcctttgccaaaagtagccacaaaagaaataaaagataaaatt
ttagtaggattatccgctgtaaaaaatgtaggagaaggagcaatagaagcaattttaaaa
gccagaaaagaaggaggagaatttaagtctttagcagatttatgtgaccgcgttaatctt
aatgcccttaatagtcgtactttagaatctttaataaaatgtggagccttcgataaaatt
gaagcaaaccgtcaccaattaattaaagacttagaaggtgtaatgaaatgggcacaagat
cgaaataaagaccgcaatataggacaattaagtttatttgataatcatatccctggagca
aaaaattcagcttttgattctgttcctaaatcttccccagtttcagattttccagccaaa
gaaaaattggaatatgaaaaagaaattctaggattttatgtatctgatcatccccttaaa
tatgcacaagaacaaaatcaaattcaagatgctatttctatcgctcaaatgaaagaaaaa
aaatctaattccaaaataaaattagtagtaatgttagctggaattaaacctcatgttaca
aaaaaaggcgaccctatggcatttattcaagtagaagatatgaccgggcaactagatgcc
gtagtttttccaaaagtatatcaagaaattaaagaattactaacagaaaattctctttta
gttttgaaaggaaaagttgataataaagatgacgaaagtcaattattagtagagagtgca
gaaacaatagaaaaggtaatggcagatgcagttaaacaagaggaaaaaccagtgacagaa
ttagataattatcaaaatgagtcaagagatgaagagataaaaaaatatcaagatattgga
aaagcagaaaaaccagtagagcaattagagactcaaagaaatcttagaaaaactgaatta
tcaaaaactgaaaatagttctgcaaaacaaagacaaataattatcttggaactgtcagta
gataagattcctgaagataattctttgtttgaacaaattcaagctattttgaaagaacaa
tcttctggagatgaggaaaaagcaaaggtagcagttggaacattaatatttgatgatcaa
cgacaacagctagtacaattcggtcgtgaattttgggtagaagatgggcagacaactatt
aatcgttttataggtataggaattgaagccaagattattccttttccttattaa
DBGET
integrated database retrieval system
