Trichodesmium erythraeum: Tery_2938
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Entry
Tery_2938 CDS
T00387
Name
(GenBank) DNA-directed RNA polymerase, gamma subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ter
Trichodesmium erythraeum
Pathway
ter03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tery_2938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ter03021
]
Tery_2938
03400 DNA repair and recombination proteins [BR:
ter03400
]
Tery_2938
Enzymes [BR:
ter01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tery_2938
Transcription machinery [BR:
ter03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tery_2938
DNA repair and recombination proteins [BR:
ter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tery_2938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
ABG52102
UniProt:
Q110H2
LinkDB
All DBs
Position
complement(4564109..4566127)
Genome browser
AA seq
672 aa
AA seq
DB search
MPKLEQRFDYVKIGLASPDRIRGWGERTLPNGTVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGHIKLAAPVTHVWYLKGI
PSYMAILLDMPLRDVEQIVYFNAYVVLEPGNHESLSYKQLLSEDVWLEIEDQIYSEDSEI
VGVDVGIGAEALQVLLANLDLEVEAEKLREEIANSKGQKRAKLIKRLRVIDNFIATGSRP
EWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIIRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLAINQCGLPREMAIELFQPFVIHRLIRQGLVNNIKAAKKLIQKGDPNVWDVLEE
VIDGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
ESQAEARLLMLASNNVLSPATGRPIITPSQDMVLGCYYLTAENHKLQGSKALYFANPDDV
ILAYQQDKIDLHTYVYLRLAPDVEIETDKPEEIPPDIQQISDELVVHTYWMPLDSKVLPN
TLGELKSEQKCENGDLVKAYNLYRIHYSQEGEIKKVYIKSRQVRQSNGLVTTQFVVTTPG
RIIINQTIQSVL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacttgaacaaagattcgattatgtgaaaattgggttagcttctccagacaga
attcgtggatggggagaaagaactctgccaaatggtactgtggtaggagaagtaactaaa
ccagaaactatcaattaccggactctaaaaccagaaatggatgggttattttgcgaacgt
atttttggtccggcgaaagactgggaatgtcattgtggaaaatataagcgagtccgacat
cggggaattgtttgtgaaagatgtggagtggaagtaactgagtcacgggtgcgtcgtcac
cgcatgggacatattaagttagcagcaccagtaactcatgtttggtacctcaaaggtatt
ccgagttacatggcaattttattagatatgccattgcgggatgtggagcaaattgtttac
ttcaatgcttatgtggtattggaaccaggaaatcacgaaagtttaagttataaacaactg
ttaagtgaagatgtttggttagaaattgaagaccaaatttatagtgaagattctgaaata
gtaggggttgatgttggtattggtgctgaggctttgcaggttttgttagcaaatctggat
ctagaagtagaagcggaaaaactacgggaagaaattgctaattctaaagggcaaaaacga
gcgaagttaatcaagcgtttacgggtaattgacaactttattgctacaggttcaagacca
gaatggatggttttggatgcaattcctgttattcctccagacctacgtccgatggtacag
ttggatgggggtaggtttgccactagtgatttgaacgatctttaccgacgagtaattaat
agaaataatcgtttggcgaggttacaggaaatattggctccagagattatcatccgcaat
gaaaaacgaatgttgcaagaagcagttgatgctttgattgataatggtcgtaggggtaga
actgtggtaggtgcaaataacaggcctctaaaatctttgagcgatattattgaaggaaaa
cagggtcgttttcggcaaaacttgttaggtaaacgggttgattattcagggagatccgta
attgttgttggacctaagttggctattaatcaatgtggtttaccacgagaaatggcaatt
gagttgtttcaaccatttgtgattcatcggttaattcgtcagggattagtgaataatatt
aaggctgccaaaaaactaattcaaaaaggagaccccaacgtctgggatgtactagaagaa
gttatagacggccatccagtaatgttaaatcgcgctccaactttgcatagattagggatt
caagcttttgaacctattttagtcgaaggtagagcaattcagctacatcctttagtatgt
ccagcatttaatgctgattttgatggagaccaaatggcggttcatgtgccactgtctttg
gagtcgcaagcggaggctaggttattgatgttggcatcgaataatgttttgtctccggca
actggtcgcccaattattacgccttctcaagatatggtgttgggttgttattatctaacg
gcagaaaaccataaactccaaggtagtaaagcactttattttgctaaccctgatgatgta
attttagcttatcaacaagataagatagatttgcatacttatgtttatttgaggttagct
cctgatgtggagattgaaactgataaaccagaagaaatacctcctgatatacaacaaata
tctgatgaactagtggttcatacttattggatgccattggatagtaaagtattacctaat
actttaggagagttgaaatcagagcaaaagtgcgaaaatggggatttggtgaaggcttat
aatctttatagaatccattatagtcaagagggagagattaagaaagtttatattaaatct
cgccaagttcggcagagtaatggattagtgactacacagtttgttgtgacaacgcctggt
cgaataattatcaatcaaacaattcaaagtgtgctttag
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