Trichodesmium erythraeum: Tery_3925
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Entry
Tery_3925 CDS
T00387
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ter
Trichodesmium erythraeum
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ter03400
]
Tery_3925
Enzymes [BR:
ter01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Tery_3925
DNA repair and recombination proteins [BR:
ter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Tery_3925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ABG52957
UniProt:
Q10XR7
LinkDB
All DBs
Position
complement(6066114..6067544)
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AA seq
476 aa
AA seq
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MKTLTLILANQLFESHPAFETDTDFVLVESKELCNRLNYHKFKLTYILTCLREYRDLLIS
KGKKVYYFELNQHLNFEDAIKKLVKEFSYTKLQFTSISDKPVRKLIGEIIHNLKLESQEL
QSPSFLTTNLDFQKYLEHSKQKYLMNSFYIWQRKRLNIFVDQNKPKFGKWSFDSENRKKL
PKNVSLPSSIWEFKSNNYQNVAQTISELYTNNPGYLDLQKSWLPINHKQAKQKLQEFLET
RFRLFGNYEDALTNRDNFVFHSVLSPMLNNGLLTPSYVLQEVLNYVEKNNNLEDFYNSIE
GFIRQIIGWREWMKLLYEFKYDENFRELNFFKAQEKLPDYFYDLKDLPENIPLTLAIEKV
SKLSWAHHIERLMILSNWMTLNSYNPKECYEWFLSQFVDAYEWVMVPNVYGMGLFADGGF
FATKPYISGGAYIKKMSDYKDNGWIKLWTDRYWQFLKNNKSQLKDNPRMKLILSKI
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttaactttaattcttgctaaccagctttttgagtctcatccagctttcgag
actgatacagattttgtattagtagagtcaaaggagctgtgcaaccgcctcaactatcat
aagtttaaacttacctatatattaacctgtctgagagaatatcgagatttacttatttca
aaaggtaaaaaagtctattattttgaattaaatcaacacctgaattttgaagatgctatc
aaaaagttagttaaagaatttagttatacaaaacttcaatttacctcaatttcagataaa
ccagttagaaaattgatcggggaaattatccacaatttaaaattagaatcccaagaatta
caatcaccctcttttttaactacaaacctagactttcaaaaatacctagagcattccaaa
cagaaatatttaatgaatagcttttatatttggcagagaaaaagactaaatatctttgtt
gaccagaacaaacctaaatttggcaaatggtctttcgactcagaaaatagaaaaaagcta
ccaaaaaatgtaagtttaccatcttcaatttgggaatttaagtcaaataattaccaaaat
gtcgcccaaacaatttccgaattatatacgaataatcccggatatttagatttgcaaaaa
agttggttacccatcaatcacaaacaagctaaacaaaaactacaagaattcttagaaacc
cgtttcagactgtttggaaactatgaagatgctcttactaatcgagataattttgttttt
cattctgtcttaagtccgatgttaaataatggattattaacacccagttatgtcttgcaa
gaagttttaaattatgttgaaaaaaacaataatttagaagacttttataattccatagaa
ggttttattcggcaaattattggctggagggaatggatgaaacttttatatgagtttaaa
tacgatgaaaactttagggaactcaatttctttaaagctcaagaaaaattaccagactac
ttttatgacttaaaagatttaccagaaaatatccccctaacattagccatagaaaaagtg
tctaaacttagttgggcacatcatattgagaggttaatgatattatcaaattggatgact
ttaaactcctataatcctaaagaatgttatgagtggtttttatctcaatttgtagatgca
tacgagtgggtaatggttcccaatgtttacggaatgggtttatttgcagatggtggtttt
tttgccactaaaccatatatttctgggggtgcttatatcaaaaaaatgtcagattataaa
gataatgggtggataaaactatggacagacagatattggcaatttttaaaaaataataaa
tctcagctcaaagataaccctagaatgaaattaattttaagtaaaatttaa
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