Trichodesmium erythraeum: Tery_4232
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Entry
Tery_4232 CDS
T00387
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ter
Trichodesmium erythraeum
Pathway
ter03420
Nucleotide excision repair
ter03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tery_4232
03430 Mismatch repair
Tery_4232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ter03400
]
Tery_4232
Enzymes [BR:
ter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tery_4232
DNA repair and recombination proteins [BR:
ter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tery_4232
MMR (mismatch excision repair)
Other MMR factors
Tery_4232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
CarD_TRCF_RID
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ABG53233
UniProt:
Q10WZ1
LinkDB
All DBs
Position
complement(6533207..6535552)
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AA seq
781 aa
AA seq
DB search
MPSTDFLTQLNLSQRQAVEHFCGPMLVVAGAGSGKTRALTYRVVHLIRHHRVHPENILAV
TFTNKAAQEMKDRIEKVFAQEQAEAKYNKPFSALTSEEQIRLRSQVYKNITKHLWVGTFH
NLCARILRFDINKYQDEKKRHWDKNFSIFDESDAQSLIKQIVTKQLNLDDKKFEPRSVRY
AISNAKNQGMSPLEYQRAEPDYRGRVIAEVYGIYQDNLAANNALDFDDLIRIPVELFRQN
EQILAYWYQRFNHILVDEYQDTNRTQYNFIRFLATNGEDPKYIKNWENRSIFVVGDVDQS
IYSFRMADYTILLDFQNDFGDGLADEYTQTMIKLEENYRSRENILAVANKLIENNTQRID
KTLKPTRGIGEEIYCYEAENELEEAEFICSKIAEITDQYPDLDLGSFAVLYRTNSQSRSL
EEKLIHYDIKYVIIGGLRFYDRKEIKDALAYLRVIANPADTVSLLRIINTPRRGIGKATI
DSLLNASSQMGIPLWEIINDQASVNALAGRSSKAVNKFAEVIQHLQDELENLTALEIVER
ILENSGYIENLKKQDTEDADNRLANLGELCSAVAQFQEDNEDTTLGSFLANASLASNLDN
LQDGQEAVSLMTLHSAKGLEFPVVFIVGLEQGLLPHFRSINDPLSLEEERRLCYVGITRA
EEQLFFSYATERRQLWGARDATVPSQFLGELPRDLINTNGMKKVIYPSKHQRKNTKNTVG
KKSVSNQIKSWQVGDKVMHESFGVGLVTNILGEGHKMSLGIKFGKSKKIIDPKTPSIEKL
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcactgactttctgactcagctaaatttatcccaacgccaagcagtagaacat
ttctgcggacctatgttggtcgtggcgggtgctgggtctggcaaaactagggcgttgact
tatcgtgtagtccatctaatacgtcatcatcgggtacatccagaaaatattctggcggtt
acctttacaaataaagctgcacaggaaatgaaggaccgcattgaaaaagtatttgctcaa
gaacaagcggaagctaaatataacaaaccattttcagcattgacatcagaagaacaaatc
aggttgcgatcgcaagtctacaaaaatatcactaaacatttatgggtgggaacttttcat
aatctttgcgctcgtattctgaggtttgatattaacaaatatcaggatgaaaaaaaacgt
cattgggataaaaatttttctatatttgatgaaagtgatgctcaaagtttaattaagcaa
attgtcactaaacagctaaatttggatgataaaaaatttgaaccacgttctgtgagatat
gccattagtaatgctaaaaaccaaggaatgtcacctctagaatatcaaagagccgagcca
gattatcggggacgggtaattgctgaagtttatggaatttatcaagataatttagctgcg
aacaatgctcttgattttgacgacctaatcagaataccagtagaattatttcggcaaaat
gagcaaatattagcttattggtatcaacgttttaatcatattttagtagatgaatatcaa
gatactaatcggactcaatataattttattagatttttagctactaatggtgaagaccct
aaatatattaaaaactgggaaaatcgttctatttttgtggtaggagatgtagaccaatct
atttattctttccgcatggcagattatacaattttgcttgattttcagaatgattttggc
gatggtttagctgatgaatatactcagacaatgattaagttggaggaaaattatcgctca
cgggaaaatattttggcagtggcaaataagttgattgaaaataatactcaacgtattgac
aaaactctcaaaccaaccaggggcataggggaagaaatttattgttatgaggcagaaaat
gagttagaagaagcagaatttatttgtagtaaaattgcagaaattacagaccaatatcca
gacttagatttaggaagcttcgctgtactttatcgaacaaactctcagtcacgctccctc
gaagaaaagttgattcattatgatattaaatatgtcataattgggggattgagattttat
gatcggaaagaaattaaggatgctttagcttatttacgagtcattgcaaatcctgctgat
actgttagtttactcagaattattaacactccgagaaggggtattggcaaggcaactatt
gatagtttattaaatgctagttcccagatgggaatacctttgtgggaaattattaatgat
caagcttcagtaaatgctttggcaggtcgttcatcaaaagctgtaaataagtttgccgaa
gtaattcaacatttgcaagatgagttagaaaatttgactgctctggaaattgttgagaga
attttagaaaattctggttatattgaaaacttgaaaaaacaggatacggaagatgcagat
aatcgactggcaaatttaggagaattatgtagtgctgtagctcagtttcaagaagataat
gaagatacaactttaggaagttttttagcaaatgcttctttagcttctaatttagataac
cttcaagatgggcaggaagctgtgtctttaatgactttacattctgctaaaggtttagaa
tttcccgtagtatttatagtgggtttggagcaaggtttattacctcattttcggagcata
aatgaccctttatctttagaagaagaaaggcgactttgttatgtaggtattactagagcc
gaagaacaattatttttttcttatgcaactgaaagacgacagctttggggagcaagagat
gccacagttccatctcaatttttgggagaattaccaagagatttgattaatactaatggg
atgaaaaaagtaatttatccgtcaaagcatcaaaggaaaaacacaaaaaatactgttgga
aaaaaatcggtaagtaatcaaataaaaagttggcaagtcggggataaagtgatgcatgaa
agttttggtgtggggttagtaacaaacattctgggtgaaggacataagatgagtttaggt
atcaaatttggtaagagtaaaaaaattattgatcccaaaacgccatcaatagaaaagttg
aattaa
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