Tessaracoccus aquimaris: BW730_03895
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Entry
BW730_03895 CDS
T04732
Name
(GenBank) RNase J family beta-CASP ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tes
Tessaracoccus aquimaris
Pathway
tes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW730_03895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tes03019
]
BW730_03895
Messenger RNA biogenesis [BR:
tes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BW730_03895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF459
Motif
Other DBs
NCBI-ProteinID:
AQP46798
UniProt:
A0A1Q2CL05
LinkDB
All DBs
Position
826573..828249
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AA seq
558 aa
AA seq
DB search
MTDAKTPPKLAPGTLRIVPLGGLGDVGRNMTAFEIDGQIALVDCGVLFPEDHHPGVDLIL
PALDYLDGRLDDVVALVLTHGHEDHIGAVPYLLKRRADIPVFGSKLTLAFLAAKLREHRI
RNFNLDAVEEGEILEVGNFEFEFLAVNHSIPDALAVAIRTSAGLVLHTGDFKMDQLPLDG
RITDLRGFARLGEEGVDLFMADSTNAEVPGFTTPEIDVEPAIARVFDAAGGKLIVACFAS
HVHRVQQVMNMAAKHGRKVVYVGRSMVRNMSTARDLGYLKVPAGSLIELKDIDKYADNEV
VIISTGSQGEPMAALSRIANKEHPVIEVGPGDTVLLASSLIPGNENSVYRVVNGLSKLGA
NVVHKGNALVHVSGHASAGELLYCYNILKPKNAMPVHGEVRHLIANGKLAEKTGMKPERV
IVAADGDVIDLKAGKARKVGSIDASYIFVDGSFVGDISDSIMDRRILGEEGFISVITVVD
LHNRSIVSGPEIQARGLAEDDSVFKDAKKRVADALTDAMRDGVDDSHRLQQVTRRAVGQW
VSKSLRRRPMIVPVVVTT
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccaagacaccccccaagctcgcccccggcaccctgcggatcgtcccgctc
ggagggctcggcgacgtggggcgcaacatgacggcgttcgagatcgacggccagatcgcg
ctcgtcgactgcggcgtgctgttcccagaggaccaccatcccggcgttgacctgatcctg
cctgcgctcgactacctcgacggccgcctcgacgacgtcgtcgccctcgtcctgacccac
ggccacgaggaccacatcggcgccgtgccctacctcctcaagcgccgcgccgacatcccc
gtattcggctccaagctgacgcttgccttcctcgccgcgaagctgcgcgagcaccggatc
cgcaacttcaacctcgacgccgtcgaggagggcgagatcctggaggtcggcaacttcgag
ttcgagttcctcgccgtcaaccactccatccccgacgcgctggccgtggcgatccgcacc
tccgcaggcctcgtcctgcacaccggcgacttcaagatggaccagttgcccctggacggc
cggatcaccgacctgcgcggcttcgcgcggctcggcgaggagggcgtcgacctgttcatg
gccgactccaccaacgccgaggtgcccggcttcaccacccctgagatcgacgtcgagccc
gccatcgcacgcgtcttcgacgcggcagggggcaagctgatcgtggcctgcttcgcctcg
cacgtgcaccgcgtgcagcaggtgatgaacatggcagccaagcacggccgcaaggtcgtc
tacgtcgggcgctccatggtgcgcaacatgtcaacggcccgcgaccttggctacctcaag
gtgcccgcgggctcgctgatcgagttgaaggacatcgacaagtacgcggacaacgaggtc
gtgatcatctcgaccggttcgcagggcgagccgatggccgcgctcagcaggatcgccaac
aaggaacacccggtcatcgaggtgggccccggcgacaccgtgctgctcgcgtcctcgctg
atccccggcaacgagaactccgtctaccgcgtcgtcaacgggctgtccaagctgggcgcc
aacgtggtgcacaagggcaacgctctggtgcacgtctccggccacgcgtcggccggggag
ttgctgtactgctacaacatcctcaagccgaagaacgcgatgccggtgcacggcgaggtc
cgtcacctgatcgccaacggcaagctcgccgagaagacgggcatgaagccggagcgcgtg
atcgtggcggccgacggagacgtcatcgacctcaaggcgggcaaggcccgcaaggtcggc
tcgatcgacgcgagctacatcttcgtggacggctccttcgtcggcgacatctccgactcg
atcatggaccgtcggatcctcggcgaggagggcttcatctccgtcatcaccgtcgtcgac
ctgcacaaccgctcgatcgtctccggccccgagatccaggcccgtggcctggcggaggac
gactcggtgttcaaggacgcgaagaagcgggtcgcggacgcgctgaccgacgcgatgcgc
gacggcgtcgacgactcgcaccgactgcagcaggtcacgcgacgcgcggtcgggcagtgg
gtgtccaagtcgctcaggcgccgcccgatgatcgttccggtggtcgtcaccacctga
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