Tetrahymena thermophila: TTHERM_000030229
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Entry
TTHERM_000030229 CDS
T01020
Name
(RefSeq) PWI domain protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tet
Tetrahymena thermophila
Pathway
tet03013
Nucleocytoplasmic transport
tet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TTHERM_000030229
03015 mRNA surveillance pathway
TTHERM_000030229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_000030229
03041 Spliceosome [BR:
tet03041
]
TTHERM_000030229
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TTHERM_000030229
Spliceosome [BR:
tet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
TTHERM_000030229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
PIN_4
Motif
Other DBs
NCBI-GeneID:
24436886
NCBI-ProteinID:
XP_012652559
TGD:
TTHERM_000030229
UniProt:
W7XIR5
LinkDB
All DBs
AA seq
298 aa
AA seq
DB search
MQGTFFRGTTHNQDARFSDKEKKLMQTMSFDEILDKRVDLKNVDLEILEPWVDQQVTKIL
GMEDEVIPAMIINELDSYKKDDKSPNGKLIQIRVTGFLERDTKKFMADLWKLLIEAQNSP
HGIPTSLIDSKKLELKEKEEQFKKSQEQLMKLEEARKKLEQDEKKLKELNRLFTDKSSSV
ERKPNNQQQLQQEQQNKDQIKDNKSNDKRHRESLKKFEEDEFLDKKEKKEVEKKKNSRRS
SSSSRSRSKKDHKRKEQSHKSRKHRDSSSSDQENKYKEKSYRDNKHKSSKNKRDRSRS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaacattttttaggggtacaactcataattaggatgctagatttagtgataaa
gaaaagaagctaatgcaaactatgagttttgatgaaatccttgataaaagagtggattta
aaaaatgtagatttagaaattttagagccatgggttgactaataagtaactaaaatttta
ggcatggaagatgaagttattccagcaatgattataaatgagcttgattcatataaaaaa
gatgataaatctccaaatggaaaattaatttaaatcagagtaactggttttttggaaaga
gatacaaaaaaatttatggcggatttatggaaattacttatagaggcacaaaattcgcct
catggaattcctacttctcttattgattctaagaaattggagctaaaagagaaagaagag
taatttaaaaagagttaagagtaattaatgaagttagaagaagctagaaaaaaattagag
taagatgaaaaaaagttaaaggagctgaatagattattcactgataaatcttcatctgtc
gaaagaaaacctaataattaatagcaactataataagaacaataaaataaagatcaaatt
aaagataataagagtaatgataaaagacatagggaatctttaaaaaaattcgaagaagat
gagttcttagacaaaaaagagaaaaaggaagttgagaaaaagaaaaacagtagacgttca
tcaagtagttcaaggtcacgtagtaaaaaggatcataaaagaaaagaatagtcacataaa
agtagaaaacatagagatagtagcagtagtgattaggagaacaaatataaagagaagagc
tatagagataataagcataaatctagtaaaaataaaagggatagaagtagaagttga
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