KEGG   Tetrahymena thermophila: TTHERM_000030229
Entry
TTHERM_000030229  CDS       T01020                                 
Name
(RefSeq) PWI domain protein
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
tet  Tetrahymena thermophila
Pathway
tet03013  Nucleocytoplasmic transport
tet03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    TTHERM_000030229
   03015 mRNA surveillance pathway
    TTHERM_000030229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tet03019]
    TTHERM_000030229
   03041 Spliceosome [BR:tet03041]
    TTHERM_000030229
Messenger RNA biogenesis [BR:tet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     TTHERM_000030229
Spliceosome [BR:tet03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    TTHERM_000030229
SSDB
Motif
Pfam: PWI PIN_4
Other DBs
NCBI-GeneID: 24436886
NCBI-ProteinID: XP_012652559
TGD: TTHERM_000030229
UniProt: W7XIR5
LinkDB
AA seq 298 aa
MQGTFFRGTTHNQDARFSDKEKKLMQTMSFDEILDKRVDLKNVDLEILEPWVDQQVTKIL
GMEDEVIPAMIINELDSYKKDDKSPNGKLIQIRVTGFLERDTKKFMADLWKLLIEAQNSP
HGIPTSLIDSKKLELKEKEEQFKKSQEQLMKLEEARKKLEQDEKKLKELNRLFTDKSSSV
ERKPNNQQQLQQEQQNKDQIKDNKSNDKRHRESLKKFEEDEFLDKKEKKEVEKKKNSRRS
SSSSRSRSKKDHKRKEQSHKSRKHRDSSSSDQENKYKEKSYRDNKHKSSKNKRDRSRS
NT seq 897 nt   +upstreamnt  +downstreamnt
atgcaaggaacattttttaggggtacaactcataattaggatgctagatttagtgataaa
gaaaagaagctaatgcaaactatgagttttgatgaaatccttgataaaagagtggattta
aaaaatgtagatttagaaattttagagccatgggttgactaataagtaactaaaatttta
ggcatggaagatgaagttattccagcaatgattataaatgagcttgattcatataaaaaa
gatgataaatctccaaatggaaaattaatttaaatcagagtaactggttttttggaaaga
gatacaaaaaaatttatggcggatttatggaaattacttatagaggcacaaaattcgcct
catggaattcctacttctcttattgattctaagaaattggagctaaaagagaaagaagag
taatttaaaaagagttaagagtaattaatgaagttagaagaagctagaaaaaaattagag
taagatgaaaaaaagttaaaggagctgaatagattattcactgataaatcttcatctgtc
gaaagaaaacctaataattaatagcaactataataagaacaataaaataaagatcaaatt
aaagataataagagtaatgataaaagacatagggaatctttaaaaaaattcgaagaagat
gagttcttagacaaaaaagagaaaaaggaagttgagaaaaagaaaaacagtagacgttca
tcaagtagttcaaggtcacgtagtaaaaaggatcataaaagaaaagaatagtcacataaa
agtagaaaacatagagatagtagcagtagtgattaggagaacaaatataaagagaagagc
tatagagataataagcataaatctagtaaaaataaaagggatagaagtagaagttga

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