Tetrahymena thermophila: TTHERM_000267919
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Entry
TTHERM_000267919 CDS
T01020
Name
(RefSeq) RNA recognition motif protein
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tet03041
]
TTHERM_000267919
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_000267919
Spliceosome [BR:
tet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TTHERM_000267919
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
TTHERM_000267919
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_11
Suf
RRM_10
RRM_MARF1
RRM_PARP14_3
BRAP2
RBD_DGKtheta
Viral_Rep
RRM_RdRP1_2
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
24438116
NCBI-ProteinID:
XP_012653061
TGD:
TTHERM_000267919
UniProt:
W7XJW4
LinkDB
All DBs
AA seq
933 aa
AA seq
DB search
MEIEEDKHIAKEKQRILNLESKLEQNKYHVKNSFLLLECYNNLQQYDKANELRSKMYKYV
TFTENQWIDWITEELTEAETSGDSNKKKDVIKIFDLAMDEGYYPTVAEMYLKFIDNLIEK
KIVTKQKSKYIIEKVIGLFFQDFTVGSSIFKQAKKIELKFQNKFSSQQITEKEYKDSQNQ
LRQLYQRELKLGLVEITKSWEEYSIWEQDEVQKKKAEQIYNKTFNEVLILSMDLEDEYIQ
SSDKYEFMINLIQKQKDDEKKLIENTKVINFFEKCLSFIENTREINFWKLYIQYLKDIET
PASHLSKIMCRATKNCKADLDLHTEYLRVLEKRQAPFDEIENELDRLLYTYKNANDDRYI
LYTSFLSYTVRNLKTVDNPYEVDSSTLNDDYINPSNISIMRKAYEKAVKYFTKLKEELES
EEDEQTEENSDSTLTVYINEIILKHAEIECYIIRDKEQLNQIMEKFVKENGENISCWKKY
YEFERVLGKTSTMRGILKRACMYVKDEPLAIHQILVDFEQDYGNVDLLEKAIQKQIQKYQ
EINEKEAAAAQEQEQGQTETNEENIIIQVEQVAQDQSTVHEEHQNNHQQQKTSNKRKPSH
DITEEEDINKKVKLDQEKTAIDQDGTKPTVFIKNLPSNCTEASISQLFENRDHIKAIRIV
KSKHGGMNKGFAYIDFSSMEEANNACLMMNDALVEGQKLYVAISAPPKKQTGQEDSTAYL
SNLPFKITEEEIRQAFPDHEINQVRMIRDGNGDFRGFAYVEFKNETDLQNAIEKFNQNPF
IKKRKVFCEKSQGLAKDRLKGLNDTLEENDQNHKNKHKKDSQNNFTVFLKNISFKALESD
IQEYFKDLQIEGIVIARDIETNQPKGFAFVTFKDRSSYQQALNMKKGSIRKREFEIQKYD
KPVPGLKKASDVQEINQIENKSNDDFKKYLFKK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaagaagataagcatatagctaaggaaaaacaaagaattttaaatttagag
agtaaactagagcagaataaatatcatgtcaagaatagcttcctcttattagaatgctat
aataatctttagtagtatgataaagcaaatgaattaaggtcaaaaatgtataaatacgta
acatttacagaaaattaatggattgattggattacagaagaattgacagaagcagaaaca
agtggagatagcaataaaaagaaagatgtaatcaaaatctttgatttagctatggatgaa
ggatattatccaacagttgctgagatgtatcttaaatttatagataacctgatagaaaaa
aagatagtaacaaaacaaaaatcaaaatacattattgaaaaagtgattggcttatttttc
taagattttacagtaggatcctcaatatttaaataagctaaaaaaatagaactcaaattc
taaaataaattctcttcttaatagattacagaaaaagaatacaaagactcatagaatcaa
ttaaggtagttatactagagagagttaaagctagggcttgtagaaattacaaaatcatgg
gaggagtattctatttgggagtaagatgaagtataaaagaagaaagcagaataaatttac
aataaaacttttaatgaagttcttattttgtcaatggatttagaagatgagtatattcaa
tcatctgataagtatgagttcatgataaacttgattcaaaaataaaaggatgacgaaaag
aaattgattgaaaacacaaaagttatcaatttctttgaaaagtgcttatcttttattgaa
aatactcgtgaaattaatttttggaagctttatatctaatatcttaaagatatagaaact
cctgctagtcatttgtctaagataatgtgtcgtgctactaaaaattgtaaggcagattta
gatttgcacactgaatatctcagagtacttgaaaaaagataagccccttttgatgaaata
gaaaatgagttagatagactactctacacatataaaaatgctaatgatgatcgttacatt
ctttacacaagctttttatcatacacagtaagaaatttaaaaactgtcgataatccttat
gaagttgactcttcaactttgaatgatgactacataaatccatcaaatatcagtattatg
agaaaagcatatgaaaaagccgttaaatattttactaaactcaaagaagagttagaatct
gaagaagatgaataaacagaagaaaactctgattctactctcactgtctatattaatgaa
attatcctaaagcatgctgaaatagaatgctacattatcagagacaaggagtaactaaat
tagattatggaaaagtttgtaaaagaaaacggagaaaacatatcatgctggaagaaatat
tatgaattcgaaagagttttagggaagacgagtactatgagaggtattcttaagagagct
tgcatgtatgttaaagacgaacccttagctattcattaaattttagttgattttgagcag
gactatggtaatgtagatctattagaaaaagcaattcaaaagtagatataaaagtatcaa
gaaattaatgaaaaagaagctgctgctgcataagagtaagaataaggataaactgaaaca
aatgaagaaaatataatcatttaagtagaataagttgcttaagattaatcaacagtacat
gaagaacatcaaaataatcactaataataaaaaacatcaaataaaagaaagccttctcat
gatattactgaagaggaagacattaataaaaaggtaaagcttgattaagaaaaaacagca
attgactaagatggaacaaaacctacagttttcataaagaatcttccttctaattgcact
gaagcatcaatttcataattatttgaaaatagagatcatattaaggcaatcagaattgtt
aaatctaaacatggaggtatgaataaaggattcgcttatattgattttagctctatggaa
gaagctaataatgcttgtttaatgatgaatgatgcccttgttgaaggttaaaagctatat
gttgccatttctgctcctcctaagaagtaaacaggataggaagatagtactgcttatttg
agtaatttaccctttaaaattacagaagaagaaattaggtaagctttccctgatcatgaa
atcaactaagtaagaatgataagagatggtaacggagattttagaggttttgcatacgtt
gagttcaaaaatgaaactgatcttcaaaacgcaatagaaaagtttaatcaaaatcctttc
ataaaaaagagaaaagtgttttgtgagaagtcttagggattagcaaaggatcgtttaaaa
ggattaaatgatacccttgaagaaaacgattagaatcataagaacaaacataaaaaggat
agccaaaataactttacagtattcctaaaaaatattagctttaaggctctcgaaagcgat
atacaagaatatttcaaagatttatagattgaaggaatagtaattgctagagatatagaa
actaattaaccaaagggatttgcatttgtcacctttaaagatagaagctcttactaataa
gccttaaatatgaaaaaaggaagtatcaggaaaagagagtttgagatttaaaaatatgat
aagcccgttccaggtcttaaaaaggcctcagatgtttaagaaatcaatcaaatagaaaat
aaatctaatgatgactttaaaaaatatttatttaaaaaatga
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