Tetrahymena thermophila: TTHERM_00028580
Help
Entry
TTHERM_00028580 CDS
T01020
Name
(RefSeq) transcription elongation factor spt5
KO
K15172
transcription elongation factor SPT5
Organism
tet
Tetrahymena thermophila
Pathway
tet03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
TTHERM_00028580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tet03021
]
TTHERM_00028580
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_00028580
Transcription machinery [BR:
tet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
TTHERM_00028580
RNA polymerase I system
TTHERM_00028580
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
TTHERM_00028580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOWx_SPT5
KOW
KOW5_SPT5
KOW4_SPT5
SH3_KIN17_C
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
7842252
NCBI-ProteinID:
XP_976854
TGD:
TTHERM_00028580
UniProt:
Q22N16
LinkDB
All DBs
AA seq
778 aa
AA seq
DB search
MSEDDFLEEDNNSYNYDDEEDGSYGEEVSNAKRKGKTLKQNKKKKQKKNQFFEEDAEESN
GEEEEEVNQEKRLRNQGDANLYRQRKARDMSEVIHDLEQRGDQTPPQMDDLDFDDIDMEH
MPENIRKYGIQQRKDQNIFSVPVRKTKEKEVVICLLNKYAQLNPEQNYGIYSISYVPSVE
SLIYIEGVNKRAVINFLDKYPDCNCNKIELVNIEEFQAIFEDQGKEQESYNAEVGQFVRI
SRKARNSDYINDIGQIHFIKKNNRVVVKLIPRVRIEDMRKKYEQMNKNSKKRNQDSFVQV
EGDAEDDQANKKGKFPYNKFGNQPVVPTRTVDEILKTRPEQQFFSLDEYEKDWSECYKAV
SEEYRPENESTNLFQHCGYVYKTFNCKDLIFNEQLKSLEELKKFYPHLELDEIMNQNGRF
LKMANNQTTFVVGDPVLIDNTLKGKIISLGKETAKVLIKKKKLSIEEEYPLKQLVKYFED
GSRVKVISGTSEGITGTVLSTKGDVCEVFTDNNNTIEVRTKDLAITGEASQDAEKIVVNE
SSDRNLGLKKKDLVKLTGFNNVGLILDISKDYIKILDQNGKIKNVSSFSINTKIDTRKYI
GKNAEGNNITNNSNIIIKQGQYSGYQCQVIHVYKSLVFLFNPKFRDTYTVENINNVSLQT
TNPVIQRQEAKIAYDMKYGKQDNLKPDDMKQYVGRQMRIIGGKYKGFQCTVTDIRNDQIK
VEINSKFITVFIPKCDLIATDKGQTELEYGKTPSYNAQSIYQPNNHENINSPSYYANN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggatgattttttagaagaagataacaactcatataattatgatgatgaagaa
gatggttcatatggggaagaagtttctaatgctaaaagaaagggcaaaactctgaaatag
aataagaaaaaaaaatagaaaaaaaattaattcttcgaagaagatgccgaagaaagtaac
ggagaagaggaagaagaagtcaaccaggaaaagagattaagaaattaaggagatgctaat
ttgtataggtagcgtaaagcaagagatatgagtgaagtcattcatgacctcgagcagaga
ggtgattaaactccaccccaaatggatgatttggactttgatgatatagatatggagcac
atgcctgaaaatatcagaaaatatggtatctaatagagaaaagattaaaatattttcagt
gttccagtcagaaaaaccaaagaaaaagaagttgttatttgtctactaaataaatatgct
caactaaatcctgagcaaaattatggaatttattctatttcatatgttccttcagttgaa
tctctaatttatattgaaggtgttaacaaaagagcagtcataaatttcttggataaatat
cctgactgtaactgcaacaaaattgaattagtcaacattgaggagttttaagccatattc
gaagactagggcaaagagcaagaatcatataacgcagaagttggctagtttgttagaatt
agtcgtaaagcaagaaactctgactacatcaacgatataggttagatccactttatcaaa
aagaataatagggttgtcgtcaaattgattcctagagttagaattgaggatatgagaaag
aaatatgaacaaatgaataaaaatagtaaaaagagaaatcaagatagctttgtttaagtt
gaaggtgatgctgaggacgattaggcaaacaagaagggtaaattcccttacaacaaattt
ggaaatcagcctgtagttccaacaagaacagttgatgaaattctaaagaccagaccagaa
tagcaattcttttctttagatgaatatgaaaaagattggtcagaatgctataaagctgtt
agtgaagaatatagaccagaaaatgagtcaacaaatcttttctaacattgtggttatgtt
tataaaacattcaattgcaaagaccttatcttcaatgaatagctcaagagtcttgaagaa
ctcaaaaagttttatcctcacttagaactagacgaaattatgaatcagaacggcagattt
ttaaaaatggccaacaatcaaactactttcgttgttggagaccctgttttaattgacaac
actcttaagggaaaaatcatttcccttggaaaagaaacagctaaagttttaattaaaaag
aaaaagctatccatagaagaagagtatccattgaaatagctcgttaagtattttgaagat
ggatcaagagtcaaagtaatctcaggtacaagcgaaggaataactggtacggttttaagc
acaaaaggtgatgtgtgtgaagtttttacagataataataatactattgaagttagaaca
aaagatctagctataacaggtgaagcaagttaagatgcagaaaaaattgtagttaatgaa
agtagtgatagaaatcttggccttaagaaaaaagatttagtgaaacttactggtttcaat
aatgtaggacttatccttgacatctctaaagattatattaagattctagatcaaaatggc
aaaatcaaaaacgtcagctctttttccataaacacaaaaatagacacaagaaaatatatt
ggtaaaaacgcagagggaaataacatcactaataactccaatattattatcaagcaagga
taatactcaggatatcaatgttaagtcattcatgtctacaagtcattagttttcttattt
aatccaaaattcagagacacatacactgtagaaaacataaacaacgtctctctacaaaca
actaatccagttatttagagataagaagctaaaattgcctacgatatgaaatatggtaag
taagacaacttaaaaccagatgatatgaagtagtatgttggtagacagatgagaattata
ggaggtaaatataagggattttaatgcactgttactgatattagaaatgactaaattaag
gttgagattaactcaaagtttattactgtcttcattcctaagtgcgatcttatagctact
gataaaggctaaacagaattagagtatggtaagactccaagctataacgctcaaagcatc
tattagccaaacaatcatgaaaacataaactctccttcttattatgctaataattga
DBGET
integrated database retrieval system
