Tetrahymena thermophila: TTHERM_000293459
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Entry
TTHERM_000293459 CDS
T01020
Name
(RefSeq) nucleoporin, putative
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tet
Tetrahymena thermophila
Pathway
tet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TTHERM_000293459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_000293459
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_000293459
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TTHERM_000293459
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TTHERM_000293459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
24438231
NCBI-ProteinID:
XP_012652367
TGD:
TTHERM_000293459
UniProt:
W7XKR1
LinkDB
All DBs
AA seq
815 aa
AA seq
DB search
MSLFGGGMIGQALGLTRGATVAPQNVPSAPVNNQGSTNAQNFSQAVSSQINTVGYQFKPC
QPPNQAVGQKAQIKQTDVLTYLCCITGIDQFQQFSMQELMLNDKKLIRQGGVQPPQGNLN
QITVGMGQNNQPSAQASLGMGGGGLFGGAQQTGGLFNGGNTQAGGISVNTQPAAGGGLFG
GQTGGLGTGLGATTTTQGGGLFGGGTVGGTTTQQGGLFGGGTGAPSITTQQGGLFGGATQ
QPGGLLTGATNPPQGGLFGGNAPTIQTGGLFGGTPATQGGLFGGAQGTGQNKGGLFGTAP
QTATGLFGQPQPQAGVFGQQQQQQVNQPNVSELLIELQRIKDAKSFSEDQQQQQDKMKNN
KYVSDKNHINHINYLKSQQQKRNVLQQYTIQNKNPNKFIEAPYNVKVNVKWDNIKRNEWQ
ILQRSQDIKNQTYINMGGEQRLFSNHNSNNILYNQLRQIERASYQYTNKSLAEKEKEYIQ
EQLESFSKSNYFKKVSQLVDQQQQKNILQDSNQEDIKTKENSIEYLYEQSLKNNLKVFDT
TVSIKLYQDQEYNIIIPLKVKSSYSISYLLTLVFDFIEEKYNIDPQTLDIYNSNYVLYQP
VLVEHLLQVRKNSLISDIEDIETNQQAQIGHFEVLYLDPEEIDEVQNEDDMEEEEYEDED
YYFDDNSNQDFSYLPIIPEGYYSEPNLKELITKSHDQLRHFKNFKIGNKFAEVCFEGEID
LIQRDFSKEILIKENEVIVYPFKPEDQPPIMPGYGINVQSTIKIFKAAKMLLQNEKFDIQ
KIERRLKKMANSKNMEIVEPYNPNTDSFTVRVLHF
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttggtggaggtatgattggttaagcattaggtttaactagaggagcaaca
gttgcaccataaaatgtaccatctgctcctgtaaataattagggaagcacaaatgcataa
aatttttcctaggctgtatctagttaaattaacactgtaggatattaatttaaaccttgc
taacctccaaattaagcagttggatagaaagcttaaatcaaataaacagatgtattgaca
tatttatgctgcattactggtatcgattagttttaatagttttcaatgcaagaattgatg
ttaaatgataaaaaacttatcagataaggcggagtttaaccaccttaagggaacttaaat
caaattacagtaggaatgggataaaataactaaccttcagcataagcatctcttggtatg
ggaggaggaggcttatttggaggagcctaataaacaggagggctattcaatggaggtaat
actcaagcaggaggaatttcagtaaatacttagcctgcagcaggtggtggattatttggc
ggttaaactggaggtcttggtacaggtttaggtgccactacaactacataaggaggtggt
ctctttggaggtggtactgttggaggaacaactacttaataaggaggactttttggaggt
ggtactggagcaccttcaataacgacttaataaggtggattatttggtggagctacttaa
tagcctggaggtttattaactggagctactaatcctcctcaaggagggttatttggtggt
aatgcaccaacaatttagactggaggattatttggtggaactcctgctacacaaggagga
ttatttggaggagcctagggaacaggttaaaataaaggaggactgtttggtactgcacca
tagacagcaactggattatttggctaaccacaaccttaagcaggtgtatttggataataa
taataacaataagtaaactaacccaacgtaagtgaattattgattgaacttcaaagaatt
aaagacgcaaaatctttttcagaagaccagcaatagcaataagataaaatgaagaataat
aagtatgtctcagacaagaatcatattaatcacataaattacttaaaaagttaacaacaa
aagagaaatgttttgtaacaatacacaatttagaataaaaatccaaataaatttattgaa
gcaccttataatgtaaaggtaaatgtgaagtgggataatatcaaaagaaatgagtggtaa
atactttaaagatcccaagacattaaaaattagacctacattaatatgggaggtgagcaa
agattgtttagcaatcataatagtaataatattttgtataattaattgagataaattgag
agagcttcatattaatatacaaacaaatccttagcagaaaaagaaaaagaatacatttag
gaatagttagagtccttttcaaaatcaaattattttaaaaaggtatcacagttagtggat
caataataacagaaaaatatattataagattctaaccaagaagatataaaaactaaggaa
aattcaattgagtatttatatgaataaagtttaaaaaataacctaaaggtatttgatact
actgtaagcattaaactttattaggattaggaatataatataattataccattaaaagta
aaatcatcttattctatttcctatcttctgacattggttttcgatttcattgaagaaaaa
tataatatagatccctaaactttagatatttataatagcaattacgtgttatattaacca
gtcttagtagagcatctgctataagtaagaaagaatagtttaatatcagatatagaagac
atagagacaaactaacaagcataaatagggcattttgaagtattatatcttgatcctgaa
gaaatagacgaagtataaaatgaagatgatatggaggaggaagaatacgaagatgaagat
tattattttgatgacaatagcaattaagatttttcttatcttccaattatacctgaaggc
tactacagcgagccaaaccttaaagaattaattacaaaatctcacgaccaactcagacac
tttaaaaattttaaaattggaaataaatttgcagaagtgtgctttgaaggcgaaatcgat
ttgatttagcgtgatttttcaaaagaaatactaatcaaagaaaatgaggttatcgtttac
ccttttaagcctgaagactagcctcctattatgccaggttatggaataaacgttcagtca
actataaaaatatttaaagcagctaaaatgttgctctaaaatgaaaaattcgacatttaa
aaaatagaaagaagattaaaaaaaatggcaaatagcaaaaatatggagatagttgaacca
tataatccaaatactgattcatttacagtaagagtattacatttttga
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