Tetrahymena thermophila: TTHERM_000318699
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Entry
TTHERM_000318699 CDS
T01020
Name
(RefSeq) U6 snRNA associated-like-Smprotein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
tet
Tetrahymena thermophila
Pathway
tet03018
RNA degradation
tet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TTHERM_000318699
09123 Folding, sorting and degradation
03018 RNA degradation
TTHERM_000318699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_000318699
03041 Spliceosome [BR:
tet03041
]
TTHERM_000318699
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TTHERM_000318699
mRNA degradation factors
5'-3' decay
Lsm complex
TTHERM_000318699
Spliceosome [BR:
tet03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
TTHERM_000318699
Complex C
U2 snRNP components
TTHERM_000318699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
24438420
NCBI-ProteinID:
XP_012654399
TGD:
TTHERM_000318699
UniProt:
W7X1H0
LinkDB
All DBs
AA seq
98 aa
AA seq
DB search
MAERQLFASFFRTLLDKNAVITVELKNDVKIKGKITYVDGNMNFNLVDIQDQETVQLANF
KNCFIRGSSVRYVHLEKEDIDVELIQEACLKEFKEKQQ
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcgttaactatttgcttcattttttagaactttacttgataaaaacgcagtc
attactgtagagttaaagaatgatgtgaagattaaaggaaaaattacatatgtagatgga
aatatgaatttcaatttagttgatattcaagattaagaaactgtttaacttgcaaatttt
aaaaactgctttataagaggatcttctgttagatatgttcatttagaaaaagaagatatt
gacgtagaattaatataagaagcatgtcttaaagagtttaaagagaagcaataatga
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integrated database retrieval system
