KEGG   Tetrahymena thermophila: TTHERM_00036960
Entry
TTHERM_00036960   CDS       T01020                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4b
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
tet  Tetrahymena thermophila
Pathway
tet03250  Viral life cycle - HIV-1
tet04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    TTHERM_00036960
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    TTHERM_00036960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tet04131]
    TTHERM_00036960
   03400 DNA repair and recombination proteins [BR:tet03400]
    TTHERM_00036960
Membrane trafficking [BR:tet04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    TTHERM_00036960
DNA repair and recombination proteins [BR:tet03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    TTHERM_00036960
SSDB
Motif
Pfam: AAA Vps4_C AAA_lid_3 AAA_16 RuvB_N AAA_14 AAA_5 IstB_IS21 TIP49 AAA_22 AAA_25 AAA_24 nSTAND3 AAA_18 ATPase_2 AAA_2 RNA_helicase DUF815 AAA_33 Parvo_NS1 PhoH AAA_17 Mg_chelatase AAA_7 Bac_DnaA AAA_28
Other DBs
NCBI-GeneID: 7844723
NCBI-ProteinID: XP_977097
TGD: TTHERM_00036960
UniProt: Q22MC3
LinkDB
AA seq 440 aa
MFYGGNNAPSFKLDNTQIRNETQYLIEKGRRSFNEGDTIEEKDKGISTFLQGLKKLELWI
QRETDTLILNTLKTQYQNNYKEVETMLTKLEQIKKNGNQPMAIAQGGGGGNNNSNKDENT
KFKEALQETIVPEKPNIKWDDIAGLVKAKESLKEAVILPIRFPEIFKGARKPWKGILLYG
PPGTGKTYLAKACATETEGTFFSVSSADLVSKYVGESEKLIKNLFALAREKKPSIIFIDE
VDSLCGNRSDGENDASRRVKTEFLVQMQGVGNDDQGVLVLGATNLPWALDPAIRRRFEKR
IYIPLPDQPARKFLLKHNLKNTPNTLKEEDFERLSQLTDGFSGADMSIFVRDAVLEPVRR
LQIATKFKKLPGDKYMPVEDNASGPDIVNLNYLSLNQQQLELPQISAQDFEIAIKKAKGT
VGKDQLKDYEKWTTEFGQDG
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgttttacggaggtaataacgctccctcatttaagttagataatacttaaattcgtaat
gaaacatagtacctgattgagaaaggtagaagatctttcaatgaaggtgatacaattgaa
gaaaaggataagggtatttcaacctttttacaaggtttaaagaagttagaactatggata
taaagagaaactgatactttaattctaaatactttaaaaacctaataccaaaataactat
aaagaagtagaaactatgcttacaaaattagaataaattaaaaaaaatggaaactagcct
atggcaatagcataaggcggcggcggtggtaacaacaatagtaacaaagatgaaaacact
aaatttaaggaagctttgtaagaaacaattgtgcccgaaaaacctaacataaaatgggat
gatattgctggtttagtgaaggctaaggaatccttaaaagaagcagtcattcttccaatt
agattccctgaaatatttaaaggtgctcgtaagccatggaaaggtatccttctttatgga
cctccaggtactggtaaaacttatttagctaaagcttgtgctacagaaactgaaggtact
ttcttttcagtatcctctgcagatcttgtcagcaaatatgttggtgaatcagaaaaatta
attaagaacttatttgctttagctagagagaaaaagccttctattatatttattgatgaa
gtagacagtttatgtggtaatagaagtgacggagaaaatgatgcttcaagaagagtaaaa
acagagtttttggtttagatgcaaggtgttggtaatgatgattaaggtgttttggtactt
ggagcaaccaatttaccatgggctctcgatcctgctattagaagaagatttgaaaaaaga
atctacatccccttgcctgactaacccgccagaaaattcttgctcaaacataaccttaaa
aatactccaaacactcttaaagaagaagattttgaaagattatcctaattaacagacgga
ttctcaggagctgatatgtctatatttgtaagagatgcagtactagaaccagttagaaga
ttatagattgcaactaaattcaaaaagttaccaggagacaaatacatgcctgtagaagat
aatgcttcaggtcctgatattgttaaccttaactatttaagcttaaatcagtaatagctt
gagcttccataaatatctgcacaagattttgaaatcgccattaaaaaagccaaaggtact
gttggaaaagattagctcaaagattatgaaaagtggactactgaatttggtcaagatggt
tga

DBGET integrated database retrieval system