Tetrahymena thermophila: TTHERM_00046770
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Entry
TTHERM_00046770 CDS
T01020
Name
(RefSeq) Utp13 specific WD40 associated domain protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
tet
Tetrahymena thermophila
Pathway
tet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TTHERM_00046770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tet03009
]
TTHERM_00046770
Ribosome biogenesis [BR:
tet03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TTHERM_00046770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Utp13
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_NOL10_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
7842590
NCBI-ProteinID:
XP_001014672
TGD:
TTHERM_00046770
UniProt:
Q23DL4
LinkDB
All DBs
AA seq
1153 aa
AA seq
DB search
MPKFQAKKKIFKQDKFKSNGKGSGPAKKNPAFMHKKNKLNKSIQRNNKNSQNHQVNGKKN
FKKFNKNDAPANNKFQKKSQDDFEDNLSNGEFQELQKSTAQAQNKKQQIQKQQQSTKKPQ
ELKSGNNKQKGLKKQNQNDDIQLGGDDLSDNVDIDMSGEEDQEYSDIDIDQSSQGGSEKD
INSEQNEDDDNDEEIEDSHNESQEGNEDESEFDEENDENFKSEVIDKLQDKDFEDQEEAD
EEEESELQEEENEIGHIEQEQNIDEVKDASKSQNQANTVEEKEVINRTHLAKYWSVVLSQ
PSIYTGGRILISPNEEFMASIANFRIIITDIATRQIINQITHEEEELCNFAIHPSNKFMA
TFTRNNILRFINLETKETIHSWRINDQWALDIVFDTTGQFMAIGCVDGFIKVYDVKKGNL
THNYKVHRGSVTKLLFHPTPNKLHLISVGEDYAIRIYDLVISTVLKSIVAHTQMVTQIIF
SEDGTNLLSASSDQKIIVWDYTNMTKQAEVLFDEQVEAMGYLKIKAKQNKKNIVQSYLVA
TGSSGILKLIDITSNDIKIIPFENLKTHEIIKIMTLPKKEQICAVTVEQNVIFYSFVEGP
SLIESDIIVGFNDEVTDAKFCKKQKKDNQVFEKEKEYVVISTNSSIMKAVELGTGKTHFI
KGHSDFVLTLDTFGPYIISAGKDKTVKLWKKADNSFEFKLLATFIGHVEAISSVCFGPKT
GKIFATGSEDQNIKIWDSSNLMARSHKIQKPENVTSSKRTVSAHTKDINVVKFSPNEKLL
ASSSQDRQIKIWDTETLSCKMILKGHKRGVWDVNFSPVEKLLASASGDSTVKVWNLEDGQ
CVNTFEGHMGSVLKCQWVCYGLEIISAGADGLIKIWNTKKQTCLNTLNKHQGKIWALDIS
AYDQNGKQFMLTGGNDSNFFMWEDVTKEEELKKKEEEHEVLIQQDNFKQLIRNQDYINAV
KLAFRFNFVSKFHQALELMFHKKDFKNEIIYSENEIKQIKKNNEEEDEFEKNIRELVTNL
IELDINKLLIYIRDLNTMQKSSKVAQRLLNYVIRSIPIDDYQEISKKFKVPKKPSKKEQE
EQTKIPSDSEKSEFEQLLQVIISYSKRHAERMERFIKKSYYLDFVLKKIDLLSIQDEENN
NKEHNKSEATNKA
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaattttaagccaaaaagaaaatttttaagtaggataagtttaaatcaaatgga
aaaggcagtggaccagctaaaaaaaatcctgcctttatgcataagaaaaataagcttaat
aaatccatttagagaaataataaaaattcttaaaatcattaagtgaatggaaagaaaaat
ttcaaaaaattcaataaaaatgatgctcctgcaaataataaattctaaaaaaagagtcaa
gacgattttgaagacaatttatctaatggtgagttttaggaattataaaaaagcactgct
taagctcaaaataaaaaataatagattcaaaagtaataatagtcaacaaagaaaccttag
gaactaaaatcaggaaacaataaataaaagggccttaaaaaataaaattaaaacgatgac
attcaattaggaggtgatgatttaagtgataatgttgatatagatatgtcaggtgaagaa
gatcaagagtatagtgatatagatattgattaaagtagctaaggaggatctgaaaaagat
atcaatagtgaataaaatgaagatgatgacaatgatgaagaaatcgaggatagtcataat
gaaagctaagaaggtaatgaagatgagtctgagtttgatgaagaaaatgatgaaaatttt
aagtctgaagtgattgataagcttcaagataaagatttcgaagattaggaagaagcagat
gaagaagaagaaagtgaattataagaagaagaaaatgaaattgggcatattgaataagaa
taaaatatagatgaagtaaaggatgctagcaaaagctaaaactaagcaaatactgttgaa
gaaaaagaagttattaaccgtacccatcttgcaaaatattggtcagttgttctttctcaa
ccttcaatttacacaggtggtagaattttgatttcacctaacgaagaatttatggcttca
attgctaactttagaataattattactgatatcgcaactcgttaaattattaattaaatt
actcatgaagaagaagagttatgcaattttgctattcatcctagcaataagtttatggca
actttcacaagaaacaatattttaagatttataaatcttgagacaaaggaaacaattcac
tcatggagaataaacgatcaatgggctcttgatatagtttttgataccacaggttagttt
atggctattggctgtgttgatggtttcattaaagtttatgatgtaaagaaaggaaatcta
actcacaactataaggttcatagaggctcagttactaaattattgttccaccccactcct
aacaaactccatttgattagtgttggagaagattacgctattagaatttatgatttagtt
atttcaacagttcttaagtctattgttgctcacacctaaatggttacttagattatcttc
tcagaagatggtaccaatcttttatctgcaagctctgattaaaaaattatagtttgggat
tataccaatatgactaaataagccgaagtcttattcgacgaataagtagaagctatggga
tatttaaagatcaaagcaaaataaaacaaaaagaatattgtctaatcttatttggtagcc
actggaagttctggtattctgaaattaatagatattacttcaaatgatattaaaataatt
ccttttgaaaatcttaaaactcatgaaatcatcaaaatcatgacacttcctaaaaaggaa
taaatttgtgcagttactgttgaatagaacgttattttttacagcttcgttgaaggacct
agcttgatagaaagtgacattattgtaggttttaatgacgaagttacagatgctaaattt
tgcaaaaaataaaagaaagataattaagtttttgaaaaagaaaaagaatatgttgttatt
tcaacaaactcaagcatcatgaaggctgtagaacttggaacaggaaaaactcattttatt
aaaggtcactctgatttcgttttaacattagatacttttggtccatacataatttctgct
ggtaaagacaaaactgtaaaactttggaaaaaggctgataattcatttgagtttaagctt
ttagctacttttattggtcacgtagaagctatttcctcagtttgttttggtcctaaaacc
ggtaaaatatttgctactggctctgaagattaaaatataaaaatttgggactcttcaaat
ctcatggccagatctcataaaatacaaaaaccagaaaatgttactagttcaaaaagaaca
gtttctgctcatacaaaagatatcaatgttgtcaaattttctccaaatgaaaaattattg
gcatcatcttcttaagatcgtcaaattaaaatttgggatactgaaactcttagttgtaag
atgattttaaaaggacacaaaagaggtgtatgggatgttaatttctcaccagttgaaaaa
ttattagcatcagctagtggtgatagcactgtcaaagtatggaatcttgaagatggttaa
tgcgtcaataccttcgaaggtcacatgggatcagtattaaaatgttaatgggtttgctat
ggattagaaattatttcagctggtgctgatggtcttataaaaatatggaacactaaaaag
caaacttgcttaaatactctgaacaagcattaaggaaaaatttgggctttagatatctct
gcttatgactaaaatggtaaataatttatgcttaccggtggtaacgattctaacttcttc
atgtgggaagatgttactaaagaagaagaacttaaaaagaaagaagaagagcatgaagta
ctcatttaacaagataatttcaaatagcttattagaaattaagattatataaatgctgta
aagctcgctttcagatttaattttgtttctaaattccaccaagctcttgagttgatgttc
cataaaaaagatttcaagaacgaaattatttacagtgagaacgaaataaaataaatcaaa
aaaaataatgaagaggaagatgaatttgaaaaaaatattagagaattagttacaaattta
atagagttagatattaataaattgctaatttatattagagatctaaatacaatgcaaaaa
tcctctaaagtagcttagagactacttaactatgttatcagatccattcctattgatgac
tatcaagaaatttcaaagaaatttaaagtaccaaagaaaccttccaaaaaagaacaagaa
gaataaactaaaattcctagcgattctgaaaagtctgaatttgaatagctacttcaagta
ataatcagctactctaagagacatgcagagcgtatggagcgtttcattaaaaaatcatat
tatcttgattttgtacttaaaaaaatagatcttttgtctatttaagacgaagaaaataat
aataaagaacataataaatctgaagctactaacaaagcttga
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