Tetrahymena thermophila: TTHERM_00049080
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Entry
TTHERM_00049080 CDS
T01020
Name
(RefSeq) structure-specific recognition protein
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tet03000
]
TTHERM_00049080
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_00049080
Transcription factors [BR:
tet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
TTHERM_00049080
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
TTHERM_00049080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
Motif
Other DBs
NCBI-GeneID:
7830955
NCBI-ProteinID:
XP_001014803
TGD:
TTHERM_00049080
UniProt:
Q23D83
LinkDB
All DBs
AA seq
437 aa
AA seq
DB search
MSDRCYKGVNWGNVTFEDDQLVLSHNKRRLCKLSLKKFTNSTVNKTDIVIDLNTVDLQDD
EDQLCEMRLFIPQQQDAQMKPEDDGEGEEKEGEDSVGGYADQLNSEIITKAKIGQYSGQS
IVKFEDISLLVPRGKYQLDMYKKTVRFHGSSFNYIVEYSNVIKGFLLPQPDEVHVAFVLG
LDQPLKIGNTVHSYIVMQFKKEQKANIKVNIDPEEKKEDKLKDLDEEYDGFLYEIAGQLF
KTLCNNVQIIMPAGFQSSDKQNCLKCTLKTHQGLLYPMRKSLIFIYKPVIHIQISDIQKV
EFNRVGNATLNKLFDVKVFTKTTTPQFFGFERKELDVLLEYFKSKNIKITYDDTNQGATF
DDEDEEFTDSISEDEEEGKRAQRKSAKRANKAVKGQSGLPLDDDDEEEDEDFDADEFESE
DDEEEEEDEDEDEDFEQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataggtgttataaaggtgtcaactggggtaatgttacctttgaagatgactaa
ttagtccttagtcataacaagagaagattgtgcaaactttctttaaagaaattcacaaac
tctactgttaacaaaactgatattgtaattgatttgaacacagttgatcttcaagatgat
gaagactaactctgtgaaatgagattatttattcctcaataataagacgcttaaatgaaa
cctgaagatgatggagaaggtgaagaaaaagaaggtgaagatagcgtaggtggatatgca
gattaacttaactctgaaattattactaaagctaaaattggctaatactctggttaatca
atagttaaattcgaagacatatcacttcttgttcctagaggtaaataccaacttgatatg
tacaaaaaaacagtaagattccacggctcttcttttaactatatagtagaatatagtaat
gttattaagggcttcctccttcctcaacctgacgaagtacatgttgctttcgttcttggt
ttagattaacccttaaaaattggtaatactgttcactcttacatagttatgcaattcaaa
aaagaacaaaaggctaacatcaaagtaaacattgatcctgaagaaaagaaggaagataaa
ttaaaggatctcgatgaagaatatgatggattcttatatgaaattgctggttaattgttt
aaaactttatgtaataatgtataaatcatcatgcctgctggtttctaaagctctgataag
taaaattgcttgaaatgtacccttaaaactcaccaaggtcttttatatcctatgagaaag
agtttgatctttatatataaacctgtaattcacatataaatcagtgatatttaaaaggtc
gaatttaatagagttggtaatgctactctgaataaattgtttgatgtcaaagtatttact
aagaccacaacccctcaattctttggttttgaaagaaaggaattagatgtcctcttagaa
tactttaaatctaaaaatattaagattacatatgatgatactaattaaggagccactttt
gatgatgaggatgaggaattcacagactctatttctgaagatgaggaagaaggtaagaga
gctcaaagaaagagtgctaagagagctaataaagcagtaaaaggataatcaggattaccc
cttgacgatgatgacgaagaagaagacgaagactttgatgctgatgaatttgaaagtgaa
gatgatgaggaagaggaagaagacgaagatgaagatgaagattttgaataatga
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