KEGG   Tetrahymena thermophila: TTHERM_00051730
Entry
TTHERM_00051730   CDS       T01020                                 
Name
(RefSeq) RNA recognition motif protein
  KO
K13126  polyadenylate-binding protein
Organism
tet  Tetrahymena thermophila
Pathway
tet03015  mRNA surveillance pathway
tet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TTHERM_00051730
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TTHERM_00051730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tet03019]
    TTHERM_00051730
   03041 Spliceosome [BR:tet03041]
    TTHERM_00051730
Messenger RNA biogenesis [BR:tet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     TTHERM_00051730
   mRNA cycle factors
    Stress granule specific factors
     TTHERM_00051730
Spliceosome [BR:tet03041]
 Complex C
  Other components
   Complex C specific factors
    TTHERM_00051730
SSDB
Motif
Pfam: MLLE RRM_1 FliL
Other DBs
NCBI-GeneID: 7829157
NCBI-ProteinID: XP_001014870
TGD: TTHERM_00051730
UniProt: Q23D16
LinkDB
AA seq 763 aa
MSKPEAAFDASKVQTQIGLRIRDLPESCTDELLFAQVFQKLKIDTKKVKAYKVKGHKTFF
NCLGNGIVYFDSEEAAQDAMSKMIGFQLHNKVISCSLMMPTSDLKLKNGKNIYVKNLKST
VTQKQFYDAAHAHGQVLSILLKQNSLGKQDGYATYKSQTSAESAEKNGLKIEETVYSAKI
LKEEDNKNKRGVMNTNSRNIELHFDTPLVCEGFDDADFENQLRAQIVEKFQLHPTSLFVW
GTRARHFSRNSEQTLQDSFNLVNSEVTQACGNPVNGVHACHEKPVGTSCPVLNYFHKKAF
VCFDIKAEAQEFLNKFYANYVSETSQNETDKQLFNFSFKKGDKEVKVATVRCVPETANKE
DKKYKELEERLNPRVLDKSFIFLKNLKKDITVEQIVKSIEDNAQTKVVSVKLSTPTQATF
IRDASKTTDTKFATIQLQDMSKANEFITKFKQEPTIRDKFNDIFENYKYANYLAPKKMHK
QDLKEKNEKSKKQQGNKSSLPPNAFPIPPQFFYNLFNNQMAFPNPKNIMPMFPFPGRQPM
TFPIGGYSNNNNFKNQQNNQNRNTSQPHNTQFNNQQPNRQYNNNFQGNFNKGNTRANTVG
QNRGYNYNNNKLQQNIGGDQKKSFNQRGTATYNHQRQQQPHDKNRNNLQKPTDLPEKKVQ
APKAPAPKAPAPAPKQQLYIPKIEDLVDKTDEQKKQLLGKPLMEKVGQSLPEHQKPLAGK
ITNLLLDFEIYEPEEIISMLSNADELKENIGTALELIQENTAQ
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgagcaaaccagaagccgctttcgatgcaagcaaagttcaaacttaaattggtttaaga
atcagagatttacctgaatcttgcactgatgaattattattcgctcaagtattttagaag
ttgaaaatcgatactaagaaggtcaaggcctacaaagttaagggtcacaagactttcttc
aattgtttgggtaatggtatcgtttatttcgattccgaagaagctgctcaagatgctatg
tccaagatgatcggattttaactccacaacaaggttattagctgcagtcttatgatgcct
acctcagatttgaagttaaagaacggcaagaacatctacgttaaaaatttgaagagtact
gtaactcaaaagcaattctacgatgctgcccacgctcacggttaggttttatctattctc
ttaaaataaaactctcttggcaagcaagacggttatgctacttacaaatcacaaacttct
gctgaatcagctgaaaagaatggtttgaaaattgaagaaactgtatactctgctaagatt
ttgaaagaagaagataacaagaataagagaggtgttatgaacacaaacagcagaaatatt
gaattacatttcgatactcctctcgtttgtgaaggtttcgatgatgctgactttgaaaac
tagttgagagcttaaatcgttgaaaaattctaacttcaccctacttccctcttcgtttgg
ggtaccagagctcgtcactttagcagaaacagcgaataaactctctaggattccttcaat
ttagttaattctgaagttacttaggcttgtggtaatcctgtcaacggtgtccatgcttgt
catgaaaaacctgtcggtacttcttgccctgtcctcaattatttccacaaaaaggctttc
gtttgctttgatattaaagctgaagcccaagaattcttgaacaagttctatgctaactat
gttagtgaaacttctcaaaatgagactgacaagcaactctttaacttctctttcaaaaag
ggagataaagaagttaaggttgctacagttagatgtgttcctgaaactgccaacaaagaa
gataagaaatacaaggaattagaagaaagacttaatcctagagttcttgataagagcttc
atcttccttaagaacttgaagaaggacattaccgttgaataaatcgtcaagtctattgaa
gataacgcttaaaccaaggtcgtctcagtcaagttgagcactcctactcaagccactttt
attagagatgcctctaagaccactgacaccaagtttgccactatctaactccaagatatg
agcaaagctaatgaatttattactaaattcaagtaagaaccaactattagagataagttc
aacgatatcttcgaaaactacaaatatgccaactacttagcccctaagaagatgcacaag
caagaccttaaggaaaagaatgaaaagagcaagaagcaataaggaaataaatcaagttta
cctcccaacgcattccctatccctcctcaattcttctataacttgtttaataaccaaatg
gctttccctaatcctaaaaatatcatgcccatgttccctttcccaggaagataacctatg
acattccccattggtggttattccaacaacaataacttcaaaaatcaataaaacaactaa
aacagaaataccagtcaacctcataatacctaattcaataattaataacctaacagacaa
tataataacaatttccaaggtaactttaacaaggggaatactagagctaacactgttggt
taaaacagaggatacaattacaataacaataaactccaataaaacataggtggtgattaa
aagaagagcttcaaccaaagaggtactgctacttataatcattagagacaacaacaaccc
cacgataagaatcgtaacaacctctaaaagcctactgaccttcctgaaaagaaagttcaa
gctcctaaagctcctgctcccaaagctcctgctcctgctcctaaataacaattgtacatt
cctaaaattgaagatctcgttgacaagactgatgaataaaagaagcaacttctcggtaaa
cctttaatggaaaaggttggctaatcactccctgaacaccaaaagcctcttgctggtaag
attactaatttactccttgatttcgaaatttatgaacctgaagaaattatttctatgctt
tccaatgctgatgaacttaaagaaaacattggtaccgctttggaactcatccaagaaaat
actgcttaatga

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