Tetrahymena thermophila: TTHERM_00051730
Help
Entry
TTHERM_00051730 CDS
T01020
Name
(RefSeq) RNA recognition motif protein
KO
K13126
polyadenylate-binding protein
Organism
tet
Tetrahymena thermophila
Pathway
tet03015
mRNA surveillance pathway
tet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TTHERM_00051730
09123 Folding, sorting and degradation
03018 RNA degradation
TTHERM_00051730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_00051730
03041 Spliceosome [BR:
tet03041
]
TTHERM_00051730
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
TTHERM_00051730
mRNA cycle factors
Stress granule specific factors
TTHERM_00051730
Spliceosome [BR:
tet03041
]
Complex C
Other components
Complex C specific factors
TTHERM_00051730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MLLE
RRM_1
FliL
Motif
Other DBs
NCBI-GeneID:
7829157
NCBI-ProteinID:
XP_001014870
TGD:
TTHERM_00051730
UniProt:
Q23D16
LinkDB
All DBs
AA seq
763 aa
AA seq
DB search
MSKPEAAFDASKVQTQIGLRIRDLPESCTDELLFAQVFQKLKIDTKKVKAYKVKGHKTFF
NCLGNGIVYFDSEEAAQDAMSKMIGFQLHNKVISCSLMMPTSDLKLKNGKNIYVKNLKST
VTQKQFYDAAHAHGQVLSILLKQNSLGKQDGYATYKSQTSAESAEKNGLKIEETVYSAKI
LKEEDNKNKRGVMNTNSRNIELHFDTPLVCEGFDDADFENQLRAQIVEKFQLHPTSLFVW
GTRARHFSRNSEQTLQDSFNLVNSEVTQACGNPVNGVHACHEKPVGTSCPVLNYFHKKAF
VCFDIKAEAQEFLNKFYANYVSETSQNETDKQLFNFSFKKGDKEVKVATVRCVPETANKE
DKKYKELEERLNPRVLDKSFIFLKNLKKDITVEQIVKSIEDNAQTKVVSVKLSTPTQATF
IRDASKTTDTKFATIQLQDMSKANEFITKFKQEPTIRDKFNDIFENYKYANYLAPKKMHK
QDLKEKNEKSKKQQGNKSSLPPNAFPIPPQFFYNLFNNQMAFPNPKNIMPMFPFPGRQPM
TFPIGGYSNNNNFKNQQNNQNRNTSQPHNTQFNNQQPNRQYNNNFQGNFNKGNTRANTVG
QNRGYNYNNNKLQQNIGGDQKKSFNQRGTATYNHQRQQQPHDKNRNNLQKPTDLPEKKVQ
APKAPAPKAPAPAPKQQLYIPKIEDLVDKTDEQKKQLLGKPLMEKVGQSLPEHQKPLAGK
ITNLLLDFEIYEPEEIISMLSNADELKENIGTALELIQENTAQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccagaagccgctttcgatgcaagcaaagttcaaacttaaattggtttaaga
atcagagatttacctgaatcttgcactgatgaattattattcgctcaagtattttagaag
ttgaaaatcgatactaagaaggtcaaggcctacaaagttaagggtcacaagactttcttc
aattgtttgggtaatggtatcgtttatttcgattccgaagaagctgctcaagatgctatg
tccaagatgatcggattttaactccacaacaaggttattagctgcagtcttatgatgcct
acctcagatttgaagttaaagaacggcaagaacatctacgttaaaaatttgaagagtact
gtaactcaaaagcaattctacgatgctgcccacgctcacggttaggttttatctattctc
ttaaaataaaactctcttggcaagcaagacggttatgctacttacaaatcacaaacttct
gctgaatcagctgaaaagaatggtttgaaaattgaagaaactgtatactctgctaagatt
ttgaaagaagaagataacaagaataagagaggtgttatgaacacaaacagcagaaatatt
gaattacatttcgatactcctctcgtttgtgaaggtttcgatgatgctgactttgaaaac
tagttgagagcttaaatcgttgaaaaattctaacttcaccctacttccctcttcgtttgg
ggtaccagagctcgtcactttagcagaaacagcgaataaactctctaggattccttcaat
ttagttaattctgaagttacttaggcttgtggtaatcctgtcaacggtgtccatgcttgt
catgaaaaacctgtcggtacttcttgccctgtcctcaattatttccacaaaaaggctttc
gtttgctttgatattaaagctgaagcccaagaattcttgaacaagttctatgctaactat
gttagtgaaacttctcaaaatgagactgacaagcaactctttaacttctctttcaaaaag
ggagataaagaagttaaggttgctacagttagatgtgttcctgaaactgccaacaaagaa
gataagaaatacaaggaattagaagaaagacttaatcctagagttcttgataagagcttc
atcttccttaagaacttgaagaaggacattaccgttgaataaatcgtcaagtctattgaa
gataacgcttaaaccaaggtcgtctcagtcaagttgagcactcctactcaagccactttt
attagagatgcctctaagaccactgacaccaagtttgccactatctaactccaagatatg
agcaaagctaatgaatttattactaaattcaagtaagaaccaactattagagataagttc
aacgatatcttcgaaaactacaaatatgccaactacttagcccctaagaagatgcacaag
caagaccttaaggaaaagaatgaaaagagcaagaagcaataaggaaataaatcaagttta
cctcccaacgcattccctatccctcctcaattcttctataacttgtttaataaccaaatg
gctttccctaatcctaaaaatatcatgcccatgttccctttcccaggaagataacctatg
acattccccattggtggttattccaacaacaataacttcaaaaatcaataaaacaactaa
aacagaaataccagtcaacctcataatacctaattcaataattaataacctaacagacaa
tataataacaatttccaaggtaactttaacaaggggaatactagagctaacactgttggt
taaaacagaggatacaattacaataacaataaactccaataaaacataggtggtgattaa
aagaagagcttcaaccaaagaggtactgctacttataatcattagagacaacaacaaccc
cacgataagaatcgtaacaacctctaaaagcctactgaccttcctgaaaagaaagttcaa
gctcctaaagctcctgctcccaaagctcctgctcctgctcctaaataacaattgtacatt
cctaaaattgaagatctcgttgacaagactgatgaataaaagaagcaacttctcggtaaa
cctttaatggaaaaggttggctaatcactccctgaacaccaaaagcctcttgctggtaag
attactaatttactccttgatttcgaaatttatgaacctgaagaaattatttctatgctt
tccaatgctgatgaacttaaagaaaacattggtaccgctttggaactcatccaagaaaat
actgcttaatga
DBGET
integrated database retrieval system