Tetrahymena thermophila: TTHERM_000549639
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Entry
TTHERM_000549639 CDS
T01020
Name
(RefSeq) small nuclear ribonucleoprotein
KO
K11098
small nuclear ribonucleoprotein F
Organism
tet
Tetrahymena thermophila
Pathway
tet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TTHERM_000549639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_000549639
03041 Spliceosome [BR:
tet03041
]
TTHERM_000549639
03032 DNA replication proteins [BR:
tet03032
]
TTHERM_000549639
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
TTHERM_000549639
Spliceosome [BR:
tet03041
]
Complex A
U1 snRNP components
Sm proteins
TTHERM_000549639
U2 snRNP components
TTHERM_000549639
Complex B
U1 snRNP components
TTHERM_000549639
U4/U6.U5 tri-snRNP components
TTHERM_000549639
Complex C
U2 snRNP components
TTHERM_000549639
DNA replication proteins [BR:
tet03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
TTHERM_000549639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
24439523
NCBI-ProteinID:
XP_012650720
TGD:
TTHERM_000549639
UniProt:
W7XFS7
LinkDB
All DBs
AA seq
79 aa
AA seq
DB search
MSNFVVNPKPFLEDLLGKQIVVKLKWGWELKGTLLSTDLYMNLHLLNAEEWVKGENKGTL
GEILIRCNNVLYIRGVENQ
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaactttgttgtcaatcctaagcctttccttgaagatttattaggaaaatagatt
gttgttaagttaaaatggggatgggaactcaaaggaactcttttgtctactgacctctat
atgaaccttcatttacttaatgctgaagaatgggttaaaggagaaaacaagggtacttta
ggagaaattttaatcagatgtaataatgttctatatattagaggagttgagaatcagtga
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