KEGG   Tetrahymena thermophila: TTHERM_000549639
Entry
TTHERM_000549639  CDS       T01020                                 
Name
(RefSeq) small nuclear ribonucleoprotein
  KO
K11098  small nuclear ribonucleoprotein F
Organism
tet  Tetrahymena thermophila
Pathway
tet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TTHERM_000549639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tet03019]
    TTHERM_000549639
   03041 Spliceosome [BR:tet03041]
    TTHERM_000549639
   03032 DNA replication proteins [BR:tet03032]
    TTHERM_000549639
Messenger RNA biogenesis [BR:tet03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     TTHERM_000549639
Spliceosome [BR:tet03041]
 Complex A
  U1 snRNP components
   Sm proteins
    TTHERM_000549639
  U2 snRNP components
    TTHERM_000549639
 Complex B
  U1 snRNP components
    TTHERM_000549639
  U4/U6.U5 tri-snRNP components
    TTHERM_000549639
 Complex C
  U2 snRNP components
    TTHERM_000549639
DNA replication proteins [BR:tet03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     TTHERM_000549639
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 24439523
NCBI-ProteinID: XP_012650720
TGD: TTHERM_000549639
UniProt: W7XFS7
LinkDB
AA seq 79 aa
MSNFVVNPKPFLEDLLGKQIVVKLKWGWELKGTLLSTDLYMNLHLLNAEEWVKGENKGTL
GEILIRCNNVLYIRGVENQ
NT seq 240 nt   +upstreamnt  +downstreamnt
atgtcaaactttgttgtcaatcctaagcctttccttgaagatttattaggaaaatagatt
gttgttaagttaaaatggggatgggaactcaaaggaactcttttgtctactgacctctat
atgaaccttcatttacttaatgctgaagaatgggttaaaggagaaaacaagggtacttta
ggagaaattttaatcagatgtaataatgttctatatattagaggagttgagaatcagtga

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