KEGG   Tetrahymena thermophila: TTHERM_000709589
Entry
TTHERM_000709589  CDS       T01020                                 
Name
(RefSeq) DnaJ domain protein
  KO
K10752  histone-binding protein RBBP4
Organism
tet  Tetrahymena thermophila
Pathway
tet03082  ATP-dependent chromatin remodeling
tet03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    TTHERM_000709589
   03083 Polycomb repressive complex
    TTHERM_000709589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tet03036]
    TTHERM_000709589
Chromosome and associated proteins [BR:tet03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     TTHERM_000709589
  Histone modification proteins
   HAT complexes
    HATB complex
     TTHERM_000709589
   HDAC complexes
    Sin3A-HDAC complex
     TTHERM_000709589
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     TTHERM_000709589
    PRC2.2
     TTHERM_000709589
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     TTHERM_000709589
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    TTHERM_000709589
  Chromatin remodeling factors
   NuRD complex
    TTHERM_000709589
   NuRF complex
    TTHERM_000709589
   NuRF complex (fruit fly)
    TTHERM_000709589
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 CAF1C_H4-bd WD40_WDHD1_1st WDR55 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 EIF3I NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_HPS5 WD_LRWD1 DUF688
Other DBs
NCBI-GeneID: 24440314
NCBI-ProteinID: XP_012651772
TGD: TTHERM_000709589
UniProt: W7XL55
LinkDB
AA seq 535 aa
MNIPDKQQKWKLYQSYIYDYVLDNNLDWPCTTCSWGPIISENSELLKQRVYFACRTDGIY
NEADTTWQKLPSFLVVAQVDIPQVGKQFNQELRNVYLQDNLKKHKNLKVKQIIVHPGDAN
MMKKCNLNPKLLATKNDASQVFLWDLDKHRQQNQFRDGIHANMPDLTLIGHTSKTPSFAL
DWAKNNYRIGSGGKDQSVLIWDVDDYQTRLTSNYMQQFNTPQFTKRELNSIGNQNEPVKL
KNSYCLTGHTDMIEDLSFSPAHKDVLVSVGDDKRLIGWDIRASSEKQFELLDLHEDDINC
VEWSLKNENYVATGSSDGNAALIDIRKMKKVRSILIPSNVNLPSDQQKNAIMSIRFQPSS
NYLAIGSDNLYIYNLDDPQFDAQGIEKPMFTHFGQKGVINDFDWNTENPWSILSTCQELE
HETMGGGSLQIFRPLDLVYMPKEEALQKLKENLIDYYQKGDSNKNSSKPRTMSIILPQQK
TQQTESQQRMDEEEDNEDIQDEDNEDEEEEDEVQEASSSNGNNSKQVGSDKMQVE
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgaatatccctgataaatagtagaaatggaagctttattaatcatatatctatgattat
gtgcttgacaataacttggattggccttgtacgacttgcagttggggtccaatcatatca
gaaaattcagaattattaaagcaaagagtttattttgcttgcaggactgatggtatatat
aatgaagctgataccacttggcaaaaacttccaagtttcctagttgttgcacaagtagac
attccctaagtcggtaagcagtttaactaagaactgagaaacgtttacttgtaggataat
ttgaagaaacataaaaatttaaaggtgaaataaattattgttcacccgggagatgctaac
atgatgaagaagtgtaatttaaatcctaaattgttagctacaaaaaatgatgcaagctaa
gtgtttttatgggatttagataaacatagatagtaaaattaatttagagatggtatacat
gctaacatgcctgatcttactttaataggacacacaagcaagactcctagttttgcatta
gattgggcgaaaaataattatagaattggtagtggaggtaaagattagagtgttttaatt
tgggatgtagatgattatcaaactagacttacaagtaattatatgtagtaatttaataca
ccttaattcacaaaaagagaattgaattctattggaaactaaaatgaacctgttaagttg
aaaaatagctattgcctcacaggacacactgacatgatagaggatctatcattttctcct
gcacacaaagatgttctggttagtgtcggagatgacaaaagactgataggttgggatatc
agggcttcttcagaaaagtaatttgaacttttagatttgcatgaggatgacattaattgc
gttgaatggagcttaaagaacgaaaactatgttgcaacaggctctagcgatggtaatgct
gctcttatagacatcagaaaaatgaagaaagtaagatctatattgattccttcaaatgta
aacctacctagtgatcaataaaaaaacgctattatgagcattcgcttttaaccatcaagc
aattacttagctataggctcagacaatctatacatatataacttagatgacccataattt
gatgcttagggaattgaaaaacctatgtttactcattttggttaaaaaggagtgattaat
gattttgattggaatacagaaaatccatggagtattttaagtacctgctaggagttagag
catgaaactatgggaggtggttcgctttaaatttttagaccattagatttggtttacatg
ccaaaagaagaggccctttaaaagttgaaagaaaatttaattgactattattagaaagga
gatagtaataaaaacagttctaaacctaggacaatgtcaataattctaccctaataaaag
acttaataaaccgaatcttaacagaggatggatgaagaagaagataatgaagatattcaa
gacgaagataatgaagatgaggaggaagaagatgaagtctaagaagccagcagttctaat
ggaaataattcaaagtaagttggtagcgataaaatgtaagtggaatga

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