Tetrahymena thermophila: TTHERM_000709589
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Entry
TTHERM_000709589 CDS
T01020
Name
(RefSeq) DnaJ domain protein
KO
K10752
histone-binding protein RBBP4
Organism
tet
Tetrahymena thermophila
Pathway
tet03082
ATP-dependent chromatin remodeling
tet03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TTHERM_000709589
03083 Polycomb repressive complex
TTHERM_000709589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_000709589
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
TTHERM_000709589
Histone modification proteins
HAT complexes
HATB complex
TTHERM_000709589
HDAC complexes
Sin3A-HDAC complex
TTHERM_000709589
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
TTHERM_000709589
PRC2.2
TTHERM_000709589
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
TTHERM_000709589
Heterochromatin formation proteins
Other heterochromatin formation proteins
TTHERM_000709589
Chromatin remodeling factors
NuRD complex
TTHERM_000709589
NuRF complex
TTHERM_000709589
NuRF complex (fruit fly)
TTHERM_000709589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
EIF3I
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD_LRWD1
DUF688
Motif
Other DBs
NCBI-GeneID:
24440314
NCBI-ProteinID:
XP_012651772
TGD:
TTHERM_000709589
UniProt:
W7XL55
LinkDB
All DBs
AA seq
535 aa
AA seq
DB search
MNIPDKQQKWKLYQSYIYDYVLDNNLDWPCTTCSWGPIISENSELLKQRVYFACRTDGIY
NEADTTWQKLPSFLVVAQVDIPQVGKQFNQELRNVYLQDNLKKHKNLKVKQIIVHPGDAN
MMKKCNLNPKLLATKNDASQVFLWDLDKHRQQNQFRDGIHANMPDLTLIGHTSKTPSFAL
DWAKNNYRIGSGGKDQSVLIWDVDDYQTRLTSNYMQQFNTPQFTKRELNSIGNQNEPVKL
KNSYCLTGHTDMIEDLSFSPAHKDVLVSVGDDKRLIGWDIRASSEKQFELLDLHEDDINC
VEWSLKNENYVATGSSDGNAALIDIRKMKKVRSILIPSNVNLPSDQQKNAIMSIRFQPSS
NYLAIGSDNLYIYNLDDPQFDAQGIEKPMFTHFGQKGVINDFDWNTENPWSILSTCQELE
HETMGGGSLQIFRPLDLVYMPKEEALQKLKENLIDYYQKGDSNKNSSKPRTMSIILPQQK
TQQTESQQRMDEEEDNEDIQDEDNEDEEEEDEVQEASSSNGNNSKQVGSDKMQVE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccctgataaatagtagaaatggaagctttattaatcatatatctatgattat
gtgcttgacaataacttggattggccttgtacgacttgcagttggggtccaatcatatca
gaaaattcagaattattaaagcaaagagtttattttgcttgcaggactgatggtatatat
aatgaagctgataccacttggcaaaaacttccaagtttcctagttgttgcacaagtagac
attccctaagtcggtaagcagtttaactaagaactgagaaacgtttacttgtaggataat
ttgaagaaacataaaaatttaaaggtgaaataaattattgttcacccgggagatgctaac
atgatgaagaagtgtaatttaaatcctaaattgttagctacaaaaaatgatgcaagctaa
gtgtttttatgggatttagataaacatagatagtaaaattaatttagagatggtatacat
gctaacatgcctgatcttactttaataggacacacaagcaagactcctagttttgcatta
gattgggcgaaaaataattatagaattggtagtggaggtaaagattagagtgttttaatt
tgggatgtagatgattatcaaactagacttacaagtaattatatgtagtaatttaataca
ccttaattcacaaaaagagaattgaattctattggaaactaaaatgaacctgttaagttg
aaaaatagctattgcctcacaggacacactgacatgatagaggatctatcattttctcct
gcacacaaagatgttctggttagtgtcggagatgacaaaagactgataggttgggatatc
agggcttcttcagaaaagtaatttgaacttttagatttgcatgaggatgacattaattgc
gttgaatggagcttaaagaacgaaaactatgttgcaacaggctctagcgatggtaatgct
gctcttatagacatcagaaaaatgaagaaagtaagatctatattgattccttcaaatgta
aacctacctagtgatcaataaaaaaacgctattatgagcattcgcttttaaccatcaagc
aattacttagctataggctcagacaatctatacatatataacttagatgacccataattt
gatgcttagggaattgaaaaacctatgtttactcattttggttaaaaaggagtgattaat
gattttgattggaatacagaaaatccatggagtattttaagtacctgctaggagttagag
catgaaactatgggaggtggttcgctttaaatttttagaccattagatttggtttacatg
ccaaaagaagaggccctttaaaagttgaaagaaaatttaattgactattattagaaagga
gatagtaataaaaacagttctaaacctaggacaatgtcaataattctaccctaataaaag
acttaataaaccgaatcttaacagaggatggatgaagaagaagataatgaagatattcaa
gacgaagataatgaagatgaggaggaagaagatgaagtctaagaagccagcagttctaat
ggaaataattcaaagtaagttggtagcgataaaatgtaagtggaatga
DBGET
integrated database retrieval system