KEGG   Tetrahymena thermophila: TTHERM_000812918
Entry
TTHERM_000812918  CDS       T01020                                 
Name
(RefSeq) WD domain, G-beta repeat protein
  KO
K14962  COMPASS component SWD2
Organism
tet  Tetrahymena thermophila
Pathway
tet03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TTHERM_000812918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tet03019]
    TTHERM_000812918
   03036 Chromosome and associated proteins [BR:tet03036]
    TTHERM_000812918
Messenger RNA biogenesis [BR:tet03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     TTHERM_000812918
Chromosome and associated proteins [BR:tet03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     TTHERM_000812918
    COMPASS/SET1 complex (yeast)
     TTHERM_000812918
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40 Beta-prop_EML_2 WD40_Prp19 WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st NBCH_WD40 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_EML ANAPC4_WD40 Beta-prop_NOL10_N ASA1 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_ACSF4 DUF7099 Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 24440781
NCBI-ProteinID: XP_012651216
TGD: TTHERM_000812918
UniProt: W7XER1
LinkDB
AA seq 325 aa
MEKEEIQINDDVMKSLKKAKVFKDNKVAITSMDISKCGEYLVTCDGEQIIEYNLLSGEQI
KKLYHKESQLDLVRFTHNSEAILCVTQKNFTIIYWSLHDNEIVKKFVGHTDIILCLDLNN
ASDVFLSTSQDCTMRFWDLNSMTLGENAILDLSERKCNPVAAFDNLGLVYAISYTETVGG
SDFTKIALYDINKHEHGAFASWNYDCPQVRTLKFSQNGEQILCSTIDGQILLIDSFEGGI
QKKIFTGGEDLMDPCITPCCQYIITGGEKGMIQVWKTKTGEEVTKLQGHFLKPQICKFSS
THCILISACKNLIFWIPDLQQKSDK
NT seq 978 nt   +upstreamnt  +downstreamnt
atggaaaaagaagaaatttagataaatgacgatgtaatgaaaagtctgaaaaaggcaaag
gtgtttaaagataataaagtagcaattacttcgatggatatatctaaatgtggagagtat
ttagtaacctgtgatggagaataaatcatagaatataatttattgagtggagagcaaatt
aaaaaactttaccacaaagaaagctaattggatttagttagatttactcacaatagtgaa
gcaattctttgtgttactcaaaaaaatttcacaattatttattggtccttgcatgacaat
gaaattgtaaagaagtttgtaggtcatacagatatcattttatgtttagatcttaataat
gcctcagatgtatttttaagtacttcttaggattgcacaatgcgtttttgggatttaaat
tctatgacattaggagaaaatgcaattctcgatttatctgaaagaaaatgcaatcctgtt
gcagcatttgataatttaggattagtttatgccatttcatacacagaaaccgttggtggc
tcagattttacaaagattgctttatacgatataaacaaacatgaacatggagcatttgct
tcttggaattatgattgcccttaagttagaactttaaagtttagttaaaatggtgaatag
atactctgttcaactattgatggacaaattctacttatagattctttcgaaggaggaata
taaaagaaaatatttactggaggtgaagatttaatggatccttgtattacaccatgttgc
taatatataattacaggaggtgaaaaaggtatgatttaggtttggaagacaaaaacagga
gaggaagtaactaaattatagggacatttcttaaaaccttagatttgtaagttctcatct
actcattgtattttaattagtgcttgtaaaaatctaatcttttggattccagatttgtag
taaaagagtgacaaatga

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