Tetrahymena thermophila: TTHERM_00106890
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Entry
TTHERM_00106890 CDS
T01020
Name
(RefSeq) replication protein complex A largest subunit
KO
K07466
replication factor A1
Organism
tet
Tetrahymena thermophila
Pathway
tet03030
DNA replication
tet03420
Nucleotide excision repair
tet03430
Mismatch repair
tet03440
Homologous recombination
tet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TTHERM_00106890
03420 Nucleotide excision repair
TTHERM_00106890
03430 Mismatch repair
TTHERM_00106890
03440 Homologous recombination
TTHERM_00106890
03460 Fanconi anemia pathway
TTHERM_00106890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tet03000
]
TTHERM_00106890
03032 DNA replication proteins [BR:
tet03032
]
TTHERM_00106890
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_00106890
Transcription factors [BR:
tet03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
TTHERM_00106890
DNA replication proteins [BR:
tet03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
TTHERM_00106890
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
TTHERM_00106890
MMR (mismatch excision repair)
TTHERM_00106890
DSBR (double strand breaks repair)
HR (homologous recombination)
TTHERM_00106890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
SHLD2_OB1
DUF223
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
7846583
NCBI-ProteinID:
XP_001012333
TGD:
TTHERM_00106890
UniProt:
D8UYN9
LinkDB
All DBs
AA seq
689 aa
AA seq
DB search
MVTQLTKNAIDSLINSTNPDEQYVIQVLKAPQSVAENLFKICISDGFCKFKKGYFVSDAA
TKCQDLKDLCIIKCKKYIDDSNHDKERIIISNYELIYSNIQEQIGKPIEYKQYKSSGFSN
PEGSTVIPSQYLSRNAQILQQNQVSQPKQMVTPPVSNINKPTPAVNNTFAQKPAVTNQNI
QRVNQNPQQMNKTAPVKQNNNNNNNNNGNNKNNSSLQISTDGDEQNLEYIRNLQPNGQPQ
TIKVRITKKGDLKSFKEKQGKLFSIDVIDKFGDECSISFFNEIAEQYDGLFKVGQVIVLK
QFSVKVNNNHQYNKGDHTVTVNKESKILICQEDPSIPMIKLNRQFIQDMQNKQKGDLIDL
IVVVKADTEVKTMILKKDNQQQSKRDIISFDESLIETEITLWGETAKDYDAKQGDIIVFK
DAKIGEFKDKKQINIGYGTQIFMNPDEQLFPQIHDVKKWYLSLNSDQLSTIQKAQGNDTG
PREVTSFESSLNILKEEIKNLQTDPEMKIWKEIRGQIMYIKDTPLYYNACFSCKKKIARN
NEVWTCINCNKDFNEPDSRYILSLNISDSTDTIWVSAFDEVGQKILGKFIFQKLNQVNLF
LSYLINLLIKQVLRVMYLDMLMKIQNTVQKQKRNCLWLPKIRNIDSCYLLNKKETKMATP
EIRQLFMLQKTFNLLMRPKRSSILWRNLW
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggttactcaattaacaaaaaatgctattgattctctaataaatagcactaatcctgat
gaatagtatgttattcaagttttaaaagctcctcaatctgttgctgaaaatcttttcaag
atttgcatttctgatggcttttgcaaattcaagaaaggatatttcgttagtgatgctgct
accaaatgccaagatttgaaggatctctgtattatcaaatgcaaaaaatatattgatgac
tcaaaccacgataaggaaagaattattatctctaactacgaattaatatattctaatatc
taagagcaaattggaaaaccaatcgaatacaaataatacaagtcaagtggattctctaat
ccagaaggatcaactgtaattccctcataatacttgagcagaaacgcttaaatacttcaa
taaaattaagtttcttaacctaagcaaatggtaactcctccagttagcaacataaataag
cctactcctgctgtaaataacacatttgcttaaaaaccagcagttacaaactaaaacatt
taaagagtaaactagaatccataacaaatgaacaaaactgcacctgtaaagcaaaataat
aataataacaataataacaatggcaacaacaaaaataattctagtttgtagatttctact
gatggagatgagtaaaatttggaatacattagaaacttatagccaaatggttaaccataa
acaatcaaagttagaatcaccaaaaagggtgatttgaaaagctttaaggaaaagtaagga
aaactcttttcaatagatgttattgataagtttggagacgaatgtagtatttctttcttc
aacgaaatagctgaatagtatgatggcttatttaaagtaggttaagttatagtcttgaaa
taattttcagtgaaagtcaacaataatcatcaatacaataagggagatcacactgtaact
gtcaataaagagagtaaaatattgatatgtcaagaagatccatctattcctatgatcaaa
ttaaatagataattcatttaagatatgtagaataaatagaaaggagatttaatcgatttg
attgttgttgtaaaggcagacacagaagttaaaaccatgatcttaaagaaagataattaa
taataatctaaaagagacataatatcatttgatgaatctctaattgaaacagaaatcaca
ctctggggagaaactgctaaagactatgatgcaaagtagggagatatcattgtatttaaa
gatgccaaaataggtgaatttaaagataaaaagtaaattaatatcggatatggaacataa
atcttcatgaatccagatgaataactcttcccatagatccatgatgtcaaaaaatggtac
ctaagcttaaattccgactaattaagcactattcaaaaggcataaggaaatgatactggt
cctagagaagtaactagctttgaatcttctctaaacattttgaaagaagaaattaaaaac
ctttaaactgacccagaaatgaaaatttggaaagaaattcgtggttaaattatgtacatt
aaagatactcctctttattataatgcttgttttagttgcaaaaagaaaatcgcacgtaat
aacgaagtatggacttgcataaattgcaataaagattttaatgaacctgactctagatat
attctctccctcaatataagtgactctacagatactatttgggtaagtgcattcgatgaa
gtaggtcaaaaaattcttggtaaatttattttttaaaagttaaactaagttaatttattt
ttatcatatttaattaacttattaattaaacaggtgttaagggtgatgtatttagatatg
ctgatgaagatacagaacacggtacagaaacaaaaaagaaattgcttatggctgcctaaa
ataaggaatatagattcctgttacttactaaataagaaagagactaaaatggcaacgcca
gagataagacagttattcatgctataaaagacttttaacctgcttatgaggccaaaaaga
tcatcaattctttggagaaatttatggtga
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integrated database retrieval system
