Tetrahymena thermophila: TTHERM_001080610
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Entry
TTHERM_001080610 CDS
T01020
Name
(RefSeq) ExoIII family purinic/apyrimidinic (AP) endonuclease family animal Ape2 subfamily protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
tet
Tetrahymena thermophila
Pathway
tet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TTHERM_001080610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_001080610
Enzymes [BR:
tet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TTHERM_001080610
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TTHERM_001080610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Nop14
Tim54
Motif
Other DBs
NCBI-GeneID:
24441638
NCBI-ProteinID:
XP_012655452
TGD:
TTHERM_001080610
UniProt:
W7X3I4
LinkDB
All DBs
AA seq
368 aa
AA seq
DB search
MPPKKTKNSGTTQTKLTDKIASKQKKAPKKEEEEEEEDQEVEVEQKKKANNKKIEVEDKE
NDSDQEEEEKTDAKSKPSSKGDTYSKEGNYQGSLGNGKFGKDTIVISSWNVNGIRAVQKK
GELENYVKSLNPDVICLNETKIDSDAFKKDSSLMKMIPSDYKQFWNFCKTSKGYAGTAIF
SKVEPISVQFDIGVKKHDEEGRTITLEYDKFYLVACYVPNAGQGLKRLDYRVKEWDIDFQ
KYLNDLKSKKNVILCGDLNVCHQEIDIAKPKGNEKSAGFTKEERAEFTKFLGQGWIDSFR
KKYPTKVQYSYWNLRNGARKTNQGWRLDYFVVNEKLYPFIQDSTINNDILGSDHCPIELK
IDNKQLKS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaaaaaaaacaaaaaattcaggaacaacttaaacaaagttaactgataagata
gcttccaagcaaaagaaggcacctaagaaagaggaagaggaagaagaggaagatcaagaa
gttgaagttgaacaaaaaaaaaaggcaaataataaaaaaattgaagttgaggataaagaa
aacgactctgattaggaagaagaagaaaagactgatgcaaaatcaaaaccaagttctaaa
ggagatacttatagtaaagaaggcaattattaaggatctttgggaaatggaaaatttggt
aaagacactattgtcatttcatcatggaatgttaatggtattcgtgcagtttaaaagaag
ggagaattagaaaactatgttaaatctttgaatccagatgttatttgtttaaatgaaact
aaaattgactcagatgcatttaaaaaagattcttcattaatgaaaatgattccttctgat
tataaataattttggaatttctgtaaaaccagtaagggttatgctggaacagcaattttc
agtaaagtagaacctattagtgtttagtttgacattggagtaaagaagcatgatgaagaa
ggaagaacaatcacattggaatacgataagttctatttagtagcatgttatgtacctaat
gcaggataaggattaaaaagacttgattacagagttaaagaatgggatatagatttctaa
aaatacttaaatgatcttaaatctaagaaaaatgtaatattatgtggtgatctcaacgtt
tgccattaagaaatagatattgctaaacccaaaggtaatgaaaagagtgcaggtttcaca
aaagaagaaagagctgaattcactaaatttttaggctaaggctggattgattctttcaga
aaaaaatatccaacaaaagtctaatacagctattggaatttaaggaatggagcaagaaaa
acaaattaaggttggagattagattacttcgtagttaacgaaaagttatatccctttatt
taagattctacaattaataatgatattttgggatcagatcattgccctattgagctaaaa
attgataataaataattaaaaagttga
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