Tetrahymena thermophila: TTHERM_00113340
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Entry
TTHERM_00113340 CDS
T01020
Name
(RefSeq) snoRNA-binding domain protein, putative
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tet
Tetrahymena thermophila
Pathway
tet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TTHERM_00113340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tet03041
]
TTHERM_00113340
Spliceosome [BR:
tet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TTHERM_00113340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Vps27_GAT-like
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
7843591
NCBI-ProteinID:
XP_001010729
TGD:
TTHERM_00113340
UniProt:
Q22Z37
LinkDB
All DBs
AA seq
625 aa
AA seq
DB search
MNQDFLKDLDDLDDDEEIVVDDGYGDDDNNEEDEMNDEDLQNLEGFDDEDLEGDNLEEQI
VKKVKTQNRENEKENAIQEFKTAFQKVQSKPISNLLNDAEFKKLYQKIQEYKGKQNVSNL
TAQDDEYHVIIRSNEYAAIIEREIQAVHKFAKDIFLKRLAELQDIVINPIDYAKCVKLIK
NESDIMKLDFSSIPTLTMQQITSISVAASQEEGKYLNASEYKQVIAACDNILELHEMSLQ
IQAYIESRMKFIAPNLSALVGSTCASRLVTAAGGVEALQRMPACNIQVMGSQKKSLLGMS
KEGQGNNRGYFAQLEMVQKAPPQFQTKLVRMLSTNVAKAVRIDFLKTCPSGSAGKRLYDL
MIQRFSKVQEPPPAKMNKPLAKPDDKPSRKRGGEKYRKIKERLGLTNLRALSQRMMFGDQ
AEEEFRDTGKGFGLLGVQAGTIKVNVSKRKIKLSNVIKFYLYILNLIQKQLKSNKSSKLN
KNKDRFHLKQLAEICKMVLHLAYNLLQIREQNLQILTFSSKMVSRQKIILTKMLVSELLQ
KQKTMQAYSQVNLRLLIEFTTQSILKFKCWLCLFLNLFFIKIIFKFAIKVVQNFQKNNQG
VFFVLNSKNQQKNQFLLKFTQKNLV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagactttttgaaagatttagatgatttggatgatgatgaggaaatagttgta
gatgatgggtatggcgatgatgataacaatgaagaagatgaaatgaatgatgaagatttg
tagaatcttgaaggttttgatgatgaggatttggagggtgataatctagaagaataaatt
gttaaaaaagtaaaaacacaaaatagagaaaatgaaaaggaaaatgctatttaagagttt
aagacagctttttaaaaagtttaatccaagcctatttcaaatttactaaatgatgctgag
ttcaaaaagctctatcaaaaaatccaagagtataaaggaaaataaaatgtttctaacttg
acagctcaagatgatgaatatcatgttataataagatcaaatgaatatgctgctattatt
gaaagagaaatctaagctgtgcataaatttgcaaaggacatcttcttaaagagattagct
gaattgcaagatattgttatcaatcctattgattatgcaaaatgtgtcaagttaattaaa
aatgaatcggatatcatgaaattagatttttctagcattcctacattaactatgcagtaa
attacttctatttctgttgcagcttcgcaagaagaaggaaagtatttaaatgctagcgaa
tacaaataagtcatagctgcttgtgacaatattttagaacttcacgagatgtcattataa
atataagcttacatagagagtcgtatgaaatttattgctccaaatttaagtgctctcgta
ggaagtacttgtgcttctcgtttggttacagcagctggtggtgtggaagctctctaaaga
atgcctgcttgcaatatctaagttatgggttcctagaaaaaatcactgttaggtatgtct
aaagaaggataaggaaataacagaggttatttcgcataattagaaatggtctaaaaagct
cctccctagttttagacaaaactagtcagaatgctttctactaatgttgcaaaagctgtt
cgtattgatttcttgaagacatgtcctagtggatctgctggaaaaagattgtatgattta
atgatttaaagattctcaaaagtctaagaacctcctccagccaagatgaacaaaccttta
gctaaacctgatgacaagcccagcagaaaaagaggtggtgagaaatatagaaagattaaa
gagcgtttaggattaactaatttgagagctttatcacaaagaatgatgtttggtgattaa
gcagaagaagaatttagagacacaggaaagggctttggtctattgggagtttaagctggt
actattaaggtcaatgtaagcaagaggaagattaaattaagtaatgttattaaattttat
ttatatattctaaatttaatataaaaatagctcaaaagcaataaaagcagcaagctaaat
aagaataaagataggttccacttaaaatagctggcggagatatgcaagatggtcttgcat
ctagcttataatttacttcaaattagggaatagaacttataaatccttaccttctcaagc
aagatggtatcaagacagaaaattattttaacaaagatgttggtttcagaactgttgtag
aaacaaaaaacaatgtaggcttactcccaggtcaatttaaggctcctaattgagtttact
acttaatctatcttaaaatttaaatgttggttgtgtttgtttttaaacttgtttttcata
aaaattatctttaaatttgcaataaaagttgtttaaaatttttaaaaaaataattagggt
gttttttttgttttaaacagtaaaaattagtaaaaaaattaatttttgctaaaatttact
caaaaaaatttagtttga
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