Tetrahymena thermophila: TTHERM_00127080
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Entry
TTHERM_00127080 CDS
T01020
Name
(RefSeq) exonuclease
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_00127080
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_00127080
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
TTHERM_00127080
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
TTHERM_00127080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
FAST_2
Motif
Other DBs
NCBI-GeneID:
7846814
NCBI-ProteinID:
XP_001016288
TGD:
TTHERM_00127080
UniProt:
I7MEC0
LinkDB
All DBs
AA seq
559 aa
AA seq
DB search
MHQHILPMFLMPDMPMFCVRNCGCRHPDRAHCFSCHKTSEKYKIKHKDDMCCESEVSLEY
LFVIDFECTCDEEKRLKIQEIIEFPIVVIDLRKKEIIDRFHSFVRPTQYPILTPFCTKLT
GITQEQVDSAPTLPEVLKEVDRFLEKYIKDGLQKVSVLNDCDSDIRNFLRKETTFKGIPV
KPVFKEFIDLRRIFPVKISEKPTNIDHMLSCVGLTFEGVKHCGLDDATNIARVALEIAKR
DYIYTEHLKEHMYPYDNPHYYEHLVIIATQPKMKNNVEIAMIAHDLRKGKTLWNNLGNKS
VKKQEMKKELFEFLDKVGIDINNSILCVQGKLENEVRAFFQTSENQPMKNEGNTNLFMSG
NLTDSTSSTCSSSSSSPSQQCQSTSTNCLTSSNISSINNSASSNQQQPQSPYQSSSFNNF
FTTYFSLNKISKIAGIPLAGNQFIQHPTYSQRYQRNRNVYQPYPFQMNGQYYPIDQSFMS
GCNNPFQTQFAKNQQNFADLNQANNENLTKWWNGIKDTTSPVTRITTMCNTVETALQNGF
IFTKDFASTIQFKRALSKM
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaacacattcttcccatgttcttgatgcctgacatgcctatgttctgcgtcaga
aattgtggctgtcgtcatcctgatcgtgctcattgcttctcatgccacaaaacaagtgaa
aaatataagattaagcacaaggatgacatgtgctgtgaaagcgaagtttctctcgaatac
ctttttgtaatcgattttgaatgcacttgcgatgaagaaaagcgtcttaaaatacaagaa
atcattgaatttcctattgttgttatcgaccttcgtaaaaaggaaatcatagatcgtttc
cattcatttgttcgtcctactcagtaccctattctaactcctttctgcactaagcttact
ggaatcacacaagaataagttgactcagctcctactctccctgaagtattgaaagaagtc
gatcgcttcttggaaaagtacatcaaggatggattacaaaaagtttcagtcttaaacgac
tgcgactctgatattcgtaatttccttcgtaaagaaaccacattcaaaggtattccagtc
aaacctgtttttaaagaattcatcgatcttcgtcgtatatttcctgttaagatatcagaa
aaacctacaaacatcgaccacatgctttcttgtgtggggttaacctttgaaggagtgaaa
cattgtggtttagatgatgcaacaaatattgccagagttgctttagaaattgctaaaaga
gattacatctacactgaacatcttaaggaacacatgtatccctatgataaccctcactac
tatgagcatttggtaatcatagcaacctaacctaaaatgaaaaataacgtagaaattgct
atgatagcccatgatttaagaaagggaaagactctttggaataatctaggaaataagagt
gtcaagaaataagaaatgaaaaaggagctcttcgaattcttagataaagttggaattgac
atcaataactctattttgtgtgttcaaggtaagcttgaaaacgaagttcgtgcattcttc
caaacttctgaaaatcaaccaatgaagaatgaaggtaacactaacttgtttatgagtgga
aacttaacagatagtacatcttctacttgttcttcttcttcatcatcaccttcttaataa
tgttaaagcacttctacaaattgcctcacaagctctaacatctcctccataaacaactct
gcatcttctaactagcaacagccccaatcaccatactaatcatcttcatttaacaatttc
tttactacctacttctcccttaacaaaataagcaaaattgcaggcataccactcgctgga
aattaattcatttaacaccctacctactcataaagatactagcgcaacagaaatgtgtac
tagccttacccattctaaatgaatggataatactatccaattgactagtcattcatgagt
ggatgcaataatccattttaaacttaatttgcaaaaaactaataaaattttgcagattta
aattaagcaaacaatgaaaacttgactaaatggtggaatggtattaaagatactacctcc
cctgttactagaattactaccatgtgtaacacagtagagacagctcttcaaaatggtttt
atcttcaccaaggacttcgcctccacaatccaattcaagagagccttatctaaaatgtga
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