Tetrahymena thermophila: TTHERM_00142380
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Entry
TTHERM_00142380 CDS
T01020
Name
(RefSeq) bromodomain protein
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tet04121
]
TTHERM_00142380
Ubiquitin system [BR:
tet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
TTHERM_00142380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Bromodomain
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
zf-P11
Motif
Other DBs
NCBI-GeneID:
7827504
NCBI-ProteinID:
XP_001011076
TGD:
TTHERM_00142380
UniProt:
I7MDR9
LinkDB
All DBs
AA seq
2061 aa
AA seq
DB search
MQEEEIIMTKHVSSKGRVFFDNQNMVKQRLYFLIIQYLQQDEYFDRRLLEQIKGYAEANH
LLGQLLAFDGSHVDATFDELNFQQKGSSCHSALFSKDENLNTILSIYQRFSAQRVKNQNK
GIQNLFIQKMTKLSQMLNEPAMYIQPARDLFIKKKRQGKSLKNTDELSNDTFILRFQHLK
TCFGHAYSADSGSINEESGEPYIPIYNTTFDKSGRLVITADEEGLIKIWSAENGLLLSNL
KGHTSGILSNDISPCNKYLVTCSIDLTARVWDIFNQRCLTCFKSKEQLNAVVFYKYQNEF
TEQLYLLMMSNVGNILIYKEDQFKENGGGINQNLQPVITLAMRKHKKMQESKIVDNDNKN
EAVCIETHPSGYLVVGTETGEILVWEKIHTLENRNRQVLPFIEKKEHSKNCQLIKFSPNG
EFMITASFDGYAKIWPWKKLIENDKRLSDQIFSIYFDNSNKCEKNCWNVAFSCKNRYAFA
TFTRKMKRTKEVETVVYVHELAEKKIKHEFTQQNTPARLQDHILVFEPHPTQENILLTAD
YAGQIIIYDVSLGCILNIFQERGYHIGYPNLEVPVLDGCWAPDGLKFVASTYYGSFSLYG
YDCAEIYKTTPTEQFFANDTEIFIYSDNHVPLSTDDDVEINTKSRGKICDYQRIPYRFEY
NNDLKKLKDRGYFEETSEMALKLIEDKISELKILENEQKEKDENFSENLVEKYLKNQEKE
KHAYFALCNQLRDSYNNANATMEGSMRVDYNERMEILKKMSKEMQKRHSLDIKKTETKTD
EDLFQQVIQQSQPRILQERQISDPAPAPLLRQESEQATLIQQRNNNRRRVIDDEDLDQGR
SNTIPFGNQQLSRRPSQMPQPAALNNQNSRTGQRGRGRRPGGRQSNTNQVGFNDDFEDSM
QSEEEIPSQDDSEVNFKDINEDDDEIQKDLLEEMEMFDDPLPRRTGGGFESNDRRNQSNN
RNRSRGGRRIVADDYLDEEEEEKKDSSNQRRTRLKRFSNTTSNETRAQTISQQQTEGQQR
QGTLRYNRNTRSSYSMQYTTGEDATLQSNAGYNSSQDYEGNTNTRLRRRNQHIIEEDNDD
LYLDNNTNSNNHHSLRQNNSSHLQQSHNLAETRANAHQTRSSTATYQDSQNNTKTLRASS
RNKKSKKNRQYNDGFNSNDSESEDRFSDEIMEEDDDEVDINYEDEDDYEYKLRKPKKSVG
GAQSLSQNNQNSRQSGRSLRTSYTNRKKIQDSDEEEDELPKQKNRSSKKNGIVNDEDDNQ
VQNEHKNIEKHKIYDNDEDEEIDDFDEEDEEYTDKKKKNYLKKRTSSEAGIKKSGQSSNK
LVKKIKTNDSDALNEDMASMPEDKKSLCQRCEQIIEGEAKSCNICKHAYHDEYCSKYRGC
LKDKKYFCFDCYANNNTVRIQKDEQDKRTFSREYLERETNDPYQYIPQINDMCYYIFQAH
EEYCEKYFEIFDYEPLIDRLQKENEKSLQNGNNKSTKKSIQRSSKLIDSGDEFQGDEHSS
NFQKKGQTSQAQDYHILPFLSYKELYKPTLCQISSIEYSYPMLSTKKMQEKYRERPIFLL
IQLKILETGEEFSVYFSNSQVQCGSFLIPQELYDQSICFQENLKVPQQLEFFYHNQVFSG
QVVEVSPKEEYQKLNSEYLKLKVKLDTTDEKIIQKLKQNLEGPNMIRISCWDVIYPIRRT
SSPDDYPNDDACLSKEETEQIFKLIQAVIDNQSEITCYFEEAVNLKKYKHYYEFVEFPMD
ISKIRRRLLNGYYRSQQSIFHDINLIDSNAHKFNNPDSPICESSKRVKEILTSIVSNFLN
VEMCLSLAIKNKKNLIKTIQTLFPNYNTNSNQNNLSINNNNIQIKIPQQSQQSLIPVPIE
KPHALINNPLLQAEQYQQKYPNSQVAYNAIQQQKPQQNYNQINNNFNQQNQQYQYNNSAY
QNNSNSNDTYFNQQNANQNGQPYAVTGLINEPSNQYFNNQQSQINQDLNYNSQLYEPINN
ADNNYSQTNYNYEANQGYDINQNVNQDYQLNEFQSQNLGQQNVQQNIPNLQSQQQQRTTR
SGRLTRNSSKFDYDQIDQRKN
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgtaggaagaagaaattattatgacaaaacacgtaagctcaaaaggcagagtgtttttt
gataatcagaacatggttaaacagcgtctatattttttgattatccagtacttatagcaa
gacgaatattttgatagaaggctactagagcagattaaaggctacgctgaagcaaatcat
ttattgggctagctactggcatttgatggaagccacgtagatgcaacatttgatgagtta
aatttctaataaaaaggaagtagttgtcattctgcactcttttcaaaggatgaaaatctt
aatacaatcttatctatttattagcgctttagtgcatagcgcgtaaaaaactaaaataaa
ggtatacagaatttgtttatttaaaagatgaccaagctttcttaaatgctcaatgagcct
gcaatgtatatttaaccagctagagacttgtttattaagaaaaagagataaggtaagagc
cttaaaaatactgatgagttatccaacgatacatttatcttgaggttttagcatttaaaa
acatgttttggtcatgcatattctgctgactcaggctctataaatgaggagagtggtgaa
ccttacattccaatatacaatacaacattcgataagagcggacgcctagttataactgca
gacgaagaaggattaattaagatttggagtgctgagaacggattacttttgtcaaattta
aaaggtcatactagcggaattttgagcaacgatatatctccttgcaataagtatttagta
acttgctctatagatttaacagcaagagtttgggatatctttaattaaaggtgtcttact
tgttttaaatcaaaagaataattaaatgctgttgttttctataaatatcaaaatgaattt
actgaataactctacctattgatgatgagcaatgttggaaatattcttatatacaaagaa
gattaattcaaagaaaatggaggtggtataaattaaaatttgcagccagttatcactctc
gcaatgagaaagcacaaaaaaatgcaagaatctaagatagttgataacgataataagaat
gaagctgtttgcatagagactcacccatctggttacttagttgtcggcactgaaacagga
gaaattttagtttgggaaaagatacacaccctcgaaaatagaaatcgctaagttcttcca
ttcatagaaaagaaagaacattctaagaattgctagctgataaaattctcacccaacgga
gagttcatgatcactgcttctttcgatggatatgcaaaaatatggccttggaaaaagctg
atagaaaacgataaaagactcagtgattaaatcttctcaatttattttgacaactccaac
aagtgcgaaaaaaactgctggaatgtagcattcagttgcaagaatagatatgcattcgct
acctttaccagaaaaatgaagaggacaaaagaagtagaaacagttgtttatgtacatgaa
ctagctgaaaagaaaatcaagcatgagtttactcaacaaaatacacccgcaagactttaa
gatcatattttagtttttgaaccccatccaacataagaaaatatcctcttaacagcagat
tacgcaggtcaaattatcatctatgatgtctctttaggatgtattttgaatatattctaa
gaaaggggataccatattggatatcctaatcttgaagtacccgttttagatggttgttgg
gcaccagatggattaaaattcgtcgcaagtacttactatggctcttttagcttgtatgga
tatgattgcgcagaaatatataagactactcctacagaataattctttgctaatgacaca
gagatatttatatatagtgataatcatgtaccactgtctacagatgatgatgtagaaatt
aatactaaaagtagaggaaaaatttgtgattattagagaatcccatatagatttgaatat
aataatgatctcaaaaaattaaaagatagaggctattttgaagaaacatcagaaatggct
ttaaagttgatagaagataaaatatctgaattaaaaatattagaaaatgaataaaaagaa
aaagatgaaaacttttcagaaaatttagttgaaaaatatttaaaaaactaagaaaaagag
aaacatgcttattttgctttatgtaattaattgagagactcctataacaatgcaaatgca
actatggaaggaagcatgagagttgattataatgaaagaatggaaattctgaaaaaaatg
tcaaaagaaatgcaaaaaagacactctttagatattaagaaaactgaaactaaaactgat
gaagatttgttttaataagttatttagcaatcgcaacctagaattctacaagaaagataa
atttctgatcctgctcctgctcctcttcttagataagaaagtgaataggctactcttata
tagtaaagaaataataatagaagaagagtcatagacgatgaagacttggatcaaggacgc
tcaaatacaataccatttgggaattaataactaagtagaaggcctagctaaatgccttaa
ccagctgctttaaataattaaaattcaagaactggatagcgcggaagaggaagaagacca
ggtggtagatagagtaatactaattaggttggattcaatgatgactttgaagactctatg
caatctgaggaagagataccgagttaagatgatagtgaggtaaatttcaaagacataaat
gaagatgatgatgaaatttaaaaagatttacttgaagaaatggagatgtttgatgatcct
ttgcctagaagaactgggggagggttcgaaagtaatgacagaagaaactaatctaataat
agaaatagatcaagaggaggaaggagaatcgtggctgatgactatttagatgaagaggaa
gaagagaaaaaggattcttcaaattagagaagaacacgcttgaaaagattttctaatacg
acttcaaatgaaacaagagcacaaaccataagccagtaataaacagaaggatagcagcgc
taaggtacattaagatataataggaatacgagaagtagttatagtatgtagtatactact
ggagaagatgctactctctaatctaatgcaggatataatagcagctaagattatgaaggt
aacacaaacacaagattgagaaggagaaatcaacacatcatcgaagaggacaatgatgat
ttatacttagacaataatactaatagcaataaccatcattctttgagatagaataactct
tctcatttataataatctcataatttggctgaaacaagagctaatgcacatcaaactaga
agctcaactgcgacatattaagattcacaaaataatacaaagactctcagagcttcatca
agaaataaaaagagcaagaaaaatagataatataatgacggctttaacagcaacgatagt
gagtctgaagataggttttcagatgaaatcatggaagaagatgacgatgaagttgatatt
aattatgaggacgaggatgattatgaatataagttgaggaaaccaaaaaaatcagtaggc
ggtgcttaatctttatcataaaataactaaaattcaagatagagtggtcgttcgcttcgt
acttcatacacaaacagaaaaaaaatttaagattctgatgaagaagaagatgaattacca
aagtaaaaaaacagaagcagtaaaaagaatggtattgttaatgacgaggatgataaccaa
gtttaaaatgagcataaaaacatagagaagcataaaatctatgataatgatgaagatgaa
gaaatagatgactttgatgaagaggacgaagaatacactgacaagaagaagaaaaattac
ttgaaaaaaagaacttcatcagaagctggtattaagaaaagtggttaaagtagtaataaa
ttagttaaaaaaataaaaactaacgactctgatgcgcttaatgaagatatggcatcaatg
cctgaagataaaaaatctctttgctaaagatgtgagcaaattattgagggagaagcaaaa
tcttgcaatatttgcaaacatgcttaccatgatgagtattgcagtaaatatagaggatgt
ttgaaagataaaaagtacttttgttttgactgttatgctaataataacacagtacgtata
cagaaagacgaataagataaaagaactttcagcagagagtacctagaaagagaaacaaac
gatccttaccaatatattccataaataaatgacatgtgttattacatcttctaggctcat
gaagagtactgtgaaaaatatttcgaaatctttgattacgaaccattgattgacagacta
taaaaagaaaatgaaaaatctctttaaaatggaaataataagtctacaaaaaaaagtatc
caaaggtcctctaaattgatagacagtggtgatgaatttcaaggagatgagcattcttct
aacttttaaaagaaaggttagacatcttaagcttaagattatcatattctaccattttta
agttacaaagagctctataagccaaccttatgtcaaataagctctatcgaatactcctat
cctatgttaagcacaaaaaagatgcaagaaaaatatagagaaagacctatattcttactt
attcagctcaaaattttagaaacaggagaagaattctcagtttatttttcaaattcttaa
gtttaatgtggaagtttcttgattccttaggaattatatgattagtcaatttgcttctaa
gaaaaccttaaggtacctcagtaattagaattcttttaccataattaagtattcagcggt
taagtggttgaagtgtcaccaaaagaagaatattaaaagttgaattctgagtacttgaag
cttaaagtcaaattagatacaacagatgaaaaaattatacaaaagttaaaataaaattta
gaagggcctaatatgattagaatctcttgctgggatgtcatatatccaatcagaagaaca
tcctctcctgatgactatccaaacgatgacgcatgtctttctaaggaagaaacagaataa
atttttaagctaatttaagcagtaattgataatcaaagtgaaataacttgctattttgaa
gaagctgtcaacttaaagaaatataaacattattatgaatttgttgaattcccaatggat
atttcaaaaattagaagaagactattaaacggatactatcgttctcaacaaagcatattt
catgatataaacttgatagattcgaatgctcataaatttaataatcctgatagtcctatc
tgtgagagttcgaagagagttaaagaaatattaacttcgattgtaagcaatttcctaaac
gtagaaatgtgtttatctctagcaataaaaaataaaaaaaatctaataaaaactatttaa
actctgttccccaactacaatactaactccaactaaaacaatttatcaataaataataat
aacatttaaataaagattccttaataatcttaataaagtttaatacctgtaccaatagaa
aaacctcacgctctaattaacaatcctctactttaggcagaacaatattaataaaaatat
cctaactctcaagtagcatataatgcaatccaacaataaaaacctcaacaaaattataat
taaattaacaataattttaatcaataaaattaataataccagtataataattccgcatat
caaaataactctaacagtaatgatacttattttaaccaacaaaatgctaattaaaatggt
taaccttatgcagttactggtttaataaacgaacctagcaactaatactttaataatcaa
cagagctagattaattaagatttgaattataattcttagttatacgaacccattaataat
gcagataataattatagttaaactaattataattatgaggcaaattaaggatatgatata
aactaaaatgtgaattaagattactaattaaacgaattctaatcttaaaatttaggatag
caaaatgtttaataaaatattcctaatttacaatcacagtaacaacaaagaactactagg
agtggaagattaactagaaattcctcaaagttcgactatgattaaatagattaaagaaaa
aattga
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integrated database retrieval system