Tetrahymena thermophila: TTHERM_00150000
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Entry
TTHERM_00150000 CDS
T01020
Name
(RefSeq) DNA mismatch repair MutS family DNA-binding domain protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
tet
Tetrahymena thermophila
Pathway
tet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TTHERM_00150000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_00150000
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TTHERM_00150000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
Motif
Other DBs
NCBI-GeneID:
7826057
NCBI-ProteinID:
XP_001021635
TGD:
TTHERM_00150000
UniProt:
I7MGE9
LinkDB
All DBs
AA seq
1389 aa
AA seq
DB search
MPPKKTKSSEVKESRSSSKKNVIDSEDSEDQAIKKTPNTKKGSNAANAKSVLSKESSVQK
SNSSDNKRALKKIQLSESEGEDKELFPTAPAKKKSAPAPKEIIVKEEESSEDDQVVKIKN
NKNGSAAAATTTNKVAKNKKKISDNESCDEEEEQMTKNKKATNQAKNKKTDKENETKQTT
QRSSRNQKKISYKEEDEEDEYTPEQEDEDFKDEEVDEVEEDEEEGDELNSDDDFEEQGKK
NKKNGQRKNNKKANGRSEGANNEKAAKKIHKAPENADDNHIIDVQKEQGKLDIEDQYELP
YFLTKKYLKDAEGRPVDDPEYDPSTLFIPIQELKKETPLFQQYWKIKVKHFDKVVFFRFG
RNFVCFYTDAILMKKLFDCYIGVWGKRPVANIFDNHYRFYVKELLEKADKSCLVVDQVQF
SDDRSNEQYLIKREVTQIITKGTYTDYVDNVEDYNARYLMCIVESETDHSFGLVLIDCTT
HQIYLDDIKNDPAGNQIRTILRKMKPVEIHSVFNNLSEQTKNICKTTCKPQFTFDKSFEF
YELQSIFEELKNEFREKIPINNPDSMKKSNQMEIEKPKANKKNNKKNNKKKQSDDDEDGS
DESSDEEKSKSLVDEEDDDGSDSEDDIENLYKPEVKKEPKFTYGELSSDYPLLLKDIEEM
YNIDKKKFEEELQKKANRKQKNSQDMQNEEDDDEPCFDIEYQYYMMLQALMLGLSYLRKL
KLNDNVFRLGSFSLLDSTVQKNTFLHLDAHAIENLDIFEVNLQNRVTSEGSLMSFIDYTK
TQFGKRMLKRWLSYPLKSIQQIEQRQEAIEDLMKIEDVIEQFDKKLSKLGDVERQISKIF
NSSQKSRLKPTSFENFSNVRLKDAYSLVEDLKNLEEILLIFKDYQDNFNSTKLKKLVTVK
DPEQINKILESTRQKNNSQTYLSQKLLNRQSSTNSKSKQQIIVGIFPDLKPFVELIQSQL
EQDEQGYCQPKQGADAVYDEIVFKMKKIYKKMNNEALVWRKKFNNNQDIKLIKSKMQWEI
QIPEKLVEGSKKPKELYLTSKVKGYQRFQTDKIISLCAKLKKVEVQLQKALSPFCERFFH
LFYQNRELLYQAVNCIGELDCLCSLAKCSLNLKIRCKPTFIPESLNKNVFELIEMYHPQL
LKENKKNLVPNDTIFEDNVTCMLVTGPNMGGKSTLLRQNCLAVILAQLGCFLPAKSFKTI
IRDRIFCRIGASDRLLEGKSTFLVEMEETGDIVKEATNQSLVLLDELGRGTSTFDGVSIA
YGVLRYLVENVKCLTLFSTHYHMLVDEFKLYKNVQSYVMDFDYCSQQKKIDFKYKYIKGS
SEKSFGVNVAKMAGLPDSVIDKAHKMEHYMNSEDQNIGNVRRITQKFNSIIEAQHQSDDT
LLQLLKNSF
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaaaagactaaatcaagcgaagtaaaagaaagcagatcttcttctaagaaa
aatgttattgattctgaagacagtgaagatcaagctattaagaaaacacctaatactaaa
aaaggatcaaatgctgcaaatgcaaaaagtgttttatcaaaagaaagctcagtttaaaaa
agcaactcatcagataataaaagagctttaaaaaaaatctaattaagtgaatctgaggga
gaagataaagagctttttcccacagcacctgcgaaaaagaaatctgctcctgctcccaaa
gaaattatagttaaggaagaagaaagtagcgaagatgattaagttgtgaaaattaaaaat
aataaaaatggatcagctgctgctgctacaacaacaaataaagttgctaaaaataaaaag
aaaattagtgataatgaatcttgtgatgaagaagaagaataaatgactaaaaataaaaaa
gcaacaaattaagctaaaaataaaaaaactgacaaagaaaatgaaactaagtagactacc
taacgctcgtcaagaaattagaaaaagatttcttacaaagaagaagatgaagaagacgaa
tacactcctgaataagaagatgaagattttaaggatgaagaagttgatgaagttgaagag
gatgaagaagaaggagatgagcttaactcagatgatgattttgaagaataaggcaaaaag
aataaaaagaatggataaagaaaaaataataaaaaagcaaatggaagaagtgaaggcgca
aataatgaaaaagctgctaaaaaaattcataaggctccagaaaatgctgatgacaatcac
ataatagatgtataaaaagaataaggaaaattggatatagaagattaatatgaattgcca
tactttttaacaaagaagtatttaaaagatgcagaaggtagaccagtagacgatcctgag
tacgatccatcaactctgtttatccctatataagagttaaaaaaggaaacacctcttttc
taataatattggaaaattaaagtaaagcattttgacaaggtagtgttttttagatttgga
agaaattttgtttgcttttatactgatgccattctgatgaaaaagctcttcgattgctat
attggagtctggggcaaaagacctgttgctaatattttcgataatcactatcgtttttat
gtaaaagaacttctcgaaaaagcagataagtcttgtttagttgtagattaagttcaattt
tcagatgatagatcaaatgaataatatcttattaaaagagaagttacctagattataact
aagggtacttatactgattatgtagataatgtcgaagattataatgcaagatatttaatg
tgtatagtagagagtgaaactgatcattcatttggtttagttcttatagattgtacaacc
catcaaatatatttagatgatatcaaaaatgacccagcaggaaaccaaattcgtacaatt
ttaagaaaaatgaaacctgttgaaattcactcagtctttaataatctttctgaataaact
aaaaatatttgcaaaacaacatgcaaaccataatttacatttgataaatcgtttgaattt
tatgagctttaaagtattttcgaagagcttaaaaatgagtttagagagaaaattccaatt
aataatcccgatagtatgaagaaaagtaattaaatggagatagaaaaacccaaggccaac
aagaaaaacaataaaaaaaataataaaaagaaataaagtgatgatgatgaagatggatca
gatgaaagctctgatgaagaaaaatcaaaaagcttagtagatgaagaagatgatgacgga
agtgacagtgaagatgatattgaaaacctgtacaagcctgaagttaaaaaagagcctaaa
tttacttacggtgaacttagcagcgattatcctttactattgaaagatatagaggaaatg
tacaacatagataaaaaaaaatttgaggaagaactctaaaaaaaagctaataggaagcaa
aaaaattctcaagatatgtaaaatgaagaagatgatgatgaaccttgcttcgacatagaa
taccagtattatatgatgctttaagcattaatgcttggactaagctacttgagaaagctg
aaattgaatgataatgtatttagacttggttccttttctcttttagattcaactgtttaa
aagaatacttttctccatttagatgctcatgcaatagaaaatttagatattttcgaggtc
aatttataaaaccgtgttacttctgaagggtctttgatgtcttttattgattacactaaa
actcaattcggaaaaagaatgcttaagagatggctatcttatccactaaaaagtatatag
caaatagaataaaggtaagaagccatagaagatttaatgaaaatagaggatgtaattgag
taatttgataagaaactcagtaaattaggagatgtcgaaagataaattagcaaaattttt
aactcatcttagaaatcaagacttaaacctacttcttttgaaaacttctcaaatgtcaga
ttaaaagatgcttattctttagttgaggatttaaaaaatttagaagaaattttacttatt
ttcaaagattattaagacaattttaattcaactaaactcaaaaaattggttactgtaaag
gatcctgaataaattaataaaattttagagagtaccagataaaaaaataactcgtaaacc
tatctttcataaaaattacttaataggtaaagcagcacaaatagtaaatctaagcagtaa
attatagttggtattttcccagacttaaagccttttgtagagttgatatagagttagctc
gaataggatgaataaggttactgccaacctaaataaggagcagatgcagtttatgatgaa
attgtatttaaaatgaaaaaaatttataagaagatgaataatgaagcacttgtctggcgt
aaaaaatttaacaataactaagatataaaattaataaaaagcaaaatgtaatgggaaata
taaatacctgagaagcttgttgaaggatcaaagaaacctaaagaactttatctcacttct
aaagttaaaggttatcaaagattctaaacagataaaataattagtctatgtgcaaaactt
aaaaaagtagaagtctaattgcaaaaagccctctctcctttttgtgaaagatttttccat
ttgttttattaaaatagagaactattgtattaggctgttaattgcattggtgagttagat
tgcttatgctctttggctaagtgttctcttaatcttaagataagatgcaaaccaactttt
attccagaaagtttaaataaaaatgttttcgaacttatagaaatgtatcacccctaactg
ctaaaggaaaataaaaaaaatttagtaccaaatgatacaattttcgaagataatgttact
tgtatgcttgtcacaggtccaaatatgggtggtaaatcaacacttcttagataaaattgc
ttagctgttattctagcacaattaggttgcttcttgcctgctaaaagttttaaaacaatt
ataagagacagaattttctgtagaataggtgcttctgatagattactagaaggaaaatca
acctttttggtagaaatggaagagacaggagatatagtgaaagaggcaacaaattaaagc
ttggttttattagatgaattaggaagaggtacaagcacatttgatggtgtatctatagca
tatggtgttttgagatatcttgttgagaatgttaaatgtcttaccctgttttcaactcat
tatcatatgcttgttgatgaatttaaactttacaaaaatgttcaatcctatgtcatggat
tttgattactgctcataataaaagaaaatagatttcaaatataaatatattaaaggttct
tcagaaaaaagttttggtgtaaatgtagctaaaatggcaggacttcctgacagtgtaata
gataaagctcataaaatggaacattatatgaattcagaagattaaaatataggtaatgtt
cgtagaattacttaaaagtttaattctattatagaagcttagcattaaagtgacgataca
cttttataattacttaaaaatagtttttga
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