Tetrahymena thermophila: TTHERM_00187140
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Entry
TTHERM_00187140 CDS
T01020
Name
(RefSeq) DEAD/DEAH-box helicase
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tet03041
]
TTHERM_00187140
03009 Ribosome biogenesis [BR:
tet03009
]
TTHERM_00187140
Enzymes [BR:
tet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TTHERM_00187140
Spliceosome [BR:
tet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
TTHERM_00187140
Ribosome biogenesis [BR:
tet03009
]
Eukaryotic type
Pre-60S particles
Helicases
TTHERM_00187140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
7844345
NCBI-ProteinID:
XP_001008880
TGD:
TTHERM_00187140
UniProt:
Q22T03
LinkDB
All DBs
AA seq
643 aa
AA seq
DB search
MFKKGQKKQQAQQKQVQNKQPKKVQQEETDLMVNIEEEIKSNYEDSGDSDEEFEAVDNGF
FSGLGGESKVKDQNITKVIEATKQDYESKMTTLEQKVKRRQRRVKETLDNSDDEEQEEND
NENDSDEEEIEKKHKNKKNVNKASNDKVLKMAKEKLDNESEHEDDDMGTQINQNANKKLK
EQKLNKKKKKTWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGK
TAAFLIPILQKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAM
QKQEAELRGNPEVIIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLLDLGFEAAAQNIV
ENCNRERQTLLFSATLTSEVNKLIDIALRKPIRIQANPDGQTNDKLIQKMLRIQHEDFRE
AALLAIAAKYYKERTIIFFKTKRQTHRMAIIFGLFGLKVCELHGDLTQNQRIQAFSDFKE
GKYQYLMATDLASRGLDIQGVKAVINFELPSEVTRYIHRVGRTARAGNEGISLTIGLDAE
LKTLKKMLKENKDKMMEKVSLSVETLQKYKEKIQNVEREVVKVLEEEQAERQLRKAEMEL
QKAENMIKHKDEIMNKPKKTWFQTNHERNKIKEAAKAAALGEK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaaaggacagaaaaaatagcaagcttagcaaaagcaggtttaaaataaatag
cctaaaaaggtttagcaagaagaaactgacttgatggtaaacatcgaagaggaaatcaag
agtaattatgaagatagcggcgattctgatgaagaatttgaagctgttgataatggattc
ttctcaggattaggtggagaatcaaaggtaaaagactaaaatataaccaaggttattgag
gctactaagtaagattacgaatctaagatgaccactcttgaataaaaggttaaaagacgt
taaagaagggttaaagaaactttagataacagtgatgatgaagaataagaagaaaatgat
aatgaaaatgattctgatgaagaagaaattgaaaaaaagcataaaaataagaagaacgtt
aacaaagcttcaaatgataaagtattaaaaatggctaaagaaaagttagacaatgaaagc
gaacatgaagatgatgatatgggaacatagatcaatcaaaatgcaaataaaaagctaaaa
gaataaaagctcaacaagaagaagaagaaaacatggtaagatttaggtttaattaaacct
ttactaaaggcagttgaagaaatgcaatatgaattcccaactaacattcaatctcttgct
attcctgctgctttgcaaggcaaagatctcttggctagttctttaacaggttctggcaaa
actgcagctttcttgattccaatcctctaaaagttctacagatcaccatttacaaactac
agcaaggcattaattgtcactcctactagagaattagctttctagatttatgaggttttc
actaaattaaataaatatacaaaacttagagcttgtttagtcataggataaagtgccatg
taaaagcaagaagctgaacttagaggaaatcctgaagtaattattgctactcctggtaga
cttattgatcatttgcaaaactctagatctattgatttggataacttagaagtattaata
tttgatgaagcagataagttattagatcttggtttcgaagcagcagctcaaaatattgta
gagaattgtaatagagaaagacaaacacttctattctctgctacacttaccagtgaagtc
aacaagcttatcgacatagcacttagaaaacctattagaatataagccaatccagatggt
taaactaatgacaagctcatttaaaagatgcttagaatataacatgaagattttagagaa
gcagcacttttagctatagcagctaagtactacaaagaaagaacaattatattcttcaag
actaaaagataaacccatagaatggcaattatttttggtcttttcggattaaaagtttgt
gagttgcatggtgatttaacttaaaattaaagaatttaagcttttagtgattttaaggag
ggaaaatactaatatttaatggccactgatttagcatctagaggtttagatatataagga
gtaaaagctgttattaattttgaattgcctagtgaagttactagatatattcatagagtt
ggtagaactgctagagctggtaatgaaggtatatctttaactattggtcttgatgctgaa
ttaaaaactctcaagaaaatgcttaaagaaaataaagataaaatgatggaaaaagttagt
ttgtctgttgaaacattataaaaatataaagaaaaaatacaaaatgtagaaagggaagtt
gttaaagttttagaagaagaataagctgaaagataactcagaaaggctgaaatggagttg
caaaaagctgaaaacatgataaagcataaagatgaaattatgaataaacccaaaaagact
tggttccaaactaatcatgaaagaaataaaatcaaagaagctgcaaaggcagctgcttta
ggtgaaaaatga
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