Tetrahymena thermophila: TTHERM_00190830
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Entry
TTHERM_00190830 CDS
T01020
Name
(RefSeq) DEAD/DEAH-box helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tet
Tetrahymena thermophila
Pathway
tet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TTHERM_00190830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tet03041
]
TTHERM_00190830
03009 Ribosome biogenesis [BR:
tet03009
]
TTHERM_00190830
Enzymes [BR:
tet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TTHERM_00190830
Spliceosome [BR:
tet03041
]
Complex A
U1 snRNP components
U1 related factors
TTHERM_00190830
Complex B
TTHERM_00190830
Ribosome biogenesis [BR:
tet03009
]
Eukaryotic type
Pre-60S particles
Helicases
TTHERM_00190830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
DUF2529
Motif
Other DBs
NCBI-GeneID:
7840097
NCBI-ProteinID:
XP_001016660
TGD:
TTHERM_00190830
UniProt:
I7MEI4
LinkDB
All DBs
AA seq
726 aa
AA seq
DB search
MINLLKISSKTKLISSLSSSASAFKIIKQNSENLQFQKLITKQLYQMSRQIQSNSNKGEG
SDYESHQSSDNQQKQGNGYFNNRNVNGQNQNGYQSNGYNNRGGYQKSYGTNKYNNGNGYG
NSNGGYFNNNNKPNGYFNANKKFGNEEQKTNVDNQKPYGYNQQNNNQSNKDLNNSGYSDE
NHLGENLHDIDYTKVELKPFQKVFYQVGKSIHTDEEIATYQREKGIIIRSKHKEVPQPFI
KWNETKFPKYIMSVIEDSKFSEPMPIQAQSFPIVLSGHDLIGIAQTGSGKTLSFMLPALV
HINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGSKCKISSVCVYGGAPKIYQEKEL
RNGCDIVIATPGRLIDFLESNVIDLKRVTYLVLDEADRMLDMGFEPSIRKIVGQIRPDRQ
TLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVNNDIDQQVEIIDKSQKYDRVKEIL
STMTRSDKTIIFTQTKKDCDDLSKALQTDNIRNICIHGDKSQRDRDKVMDLFKTGRVNTL
IATDVASRGLDVKDIKLVINYDFPKQIEDYVHRVGRTGRAGAQGKAISFLDQYEDKKISK
ELVDVLKQNNQEISQDLLELSEANYKGNYSNNYNKNRSSKPYSGGYNNNRNYYGNNNEMG
FRNSNNGFSNNGYQNGNSNGGYRSQQNNNGFQNNNYNRDFPKRQEDGNGGSEQPKKFGFF
NPKKDN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgattaacttattaaaaattagtagtaagactaagttaattagtagtttgagctcaagt
gcttctgcatttaaaataatcaaacaaaattctgaaaatttataatttcaaaaactaata
accaaataattatatcaaatgtcaagataaatctaaagcaattctaataagggagaaggc
tcagactatgagagtcatcaaagctccgacaaccaacagaaataaggaaatggctacttc
aataacagaaatgtcaatggccaaaattaaaatggctactaaagcaatggctataacaat
agaggtggatatcaaaagagctacggaacaaacaagtacaataacggaaatggctatggt
aactccaatggtggctacttcaataacaacaataaaccaaatggatacttcaatgccaat
aaaaagtttggaaatgaagagcaaaaaactaacgtagataatcaaaaaccttacggatac
aactaataaaataacaactagtctaataaggacttgaataacagcggctacagtgatgaa
aatcacttaggtgaaaatttacacgatattgactacacaaaggtcgagctcaagcctttc
taaaaggttttctactaagttggtaaatcaatacatactgatgaagaaattgctacctac
taaagagagaagggtattataatccgttcaaagcacaaagaggttccctaacctttcata
aaatggaacgaaaccaaattccccaaatatattatgtccgtaatagaagacagcaaattc
tctgaacctatgcccatctaagctcagtctttccctattgtgttgagtggtcatgacttg
ataggtattgcttaaactggttcaggaaaaactctttctttcatgcttcctgctcttgtt
catattaatgcccaagatcccgtaaagccaggcgaaggccctattgcattagttttggct
ccaaccagagaattggcaaactaaatataagaacaatgcttcaaatttggcagcaaatgc
aaaattagcagtgtttgtgtttatggtggtgcccctaagatttaccaagaaaaggaactc
cgtaatggctgcgatattgtcattgctactcctggtagactcattgatttcttggaaagt
aatgttatcgacttgaagagagtaacttatcttgttctcgatgaagccgatagaatgctt
gatatgggttttgaaccttccatcagaaaaatcgttggctaaatcagacctgatagataa
actcttatgttctctgctacttggccttaaactgttagaagacttgcccttgatttttgt
catggagatcctattcacattcaaattggtgatatggaaaacaacgtcaacaatgatatc
gatcaataagttgaaatcattgataaaagccaaaaatacgatagagttaaagaaattctt
agcacaatgacaagatctgataagaccattatctttacttaaacaaagaaagattgtgat
gatcttagcaaagctctctaaactgacaatataagaaacatctgtatccatggtgataaa
tcccaaagagatagagataaagttatggacctcttcaaaactggtagagtcaacacttta
attgcaaccgatgttgcatctagaggtcttgatgtcaaggacattaaattagttattaac
tatgatttccctaagcaaatcgaagactacgtacatagagtcggtagaactggaagagca
ggtgcttaaggtaaagctatttcattccttgatcaatatgaagacaagaagatttctaag
gaattagttgatgtcttgaagtaaaataattaagaaattagtcaagatcttcttgaactc
tctgaagcaaactacaagggtaattacagtaataactataataagaacagaagtagcaag
ccttacagtggtggatacaataataacagaaactattatggaaataataacgaaatgggt
ttcagaaacagcaataatggattctctaacaatggctaccaaaatggtaacagcaacgga
ggttatagaagccaatagaacaataatgggttccaaaataataactataaccgtgacttc
cctaagagataggaagatggcaacggtggttctgaacaacctaagaaattcggtttcttc
aacccaaagaaagacaactga
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