Tetrahymena thermophila: TTHERM_00193849
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Entry
TTHERM_00193849 CDS
T01020
Name
(RefSeq) conjugation stage-specific protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
tet
Tetrahymena thermophila
Pathway
tet03020
RNA polymerase
tet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TTHERM_00193849
09124 Replication and repair
03420 Nucleotide excision repair
TTHERM_00193849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tet03021
]
TTHERM_00193849
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_00193849
Transcription machinery [BR:
tet03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
TTHERM_00193849
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TTHERM_00193849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
Fer4_7
Fer4_9
SduA_C
DUF7607
Motif
Other DBs
NCBI-GeneID:
7844612
NCBI-ProteinID:
XP_001471367
TGD:
TTHERM_00193849
UniProt:
A4VDR4
LinkDB
All DBs
AA seq
310 aa
AA seq
DB search
MEGIKLTLTNLEEFKCEFTLENCDISLANSLRRILLAEIETIAIHNVKVYENTSSLPDEY
IAHRLGLIPLNSAKVDDYNYIWNCNCQGECDRCTIHFDLRVSNFTNEVLEVTSLDLKQRQ
DHTDEDAVRPIKVYSILRDEYGNKREVGIPIIKLSKGQQIHFECEAQKGIGKMHSKWNPV
CISTFSVEPEIIFDQEIQNLDIEQKKALVNACPTKVFGINPHTNTLEVQDHMKCMYCEEC
VYKCAEDFQKPKLIKIDHKKDKFFFKVETTGVMKPVEVLRRGFSTLRQKLDFMREQIQEN
SNNQFEYGNE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaattaaattaactcttacaaacctcgaagaattcaaatgcgaatttacccta
gaaaattgcgatatctcattagctaattcattaagaagaattcttttggctgaaattgaa
acaatagctatccataacgttaaagtatatgagaatacatcttctcttcctgatgaatac
atagcacatagattaggtttaattcctttaaattctgctaaagttgatgattataactat
atttggaattgcaattgccaaggtgaatgcgatagatgtacaattcattttgatttgaga
gtgagtaactttacaaatgaagtcttagaagttacttctcttgatcttaaataaagatag
gaccacactgatgaagatgccgttcgccctataaaggtatattcaattttacgtgatgaa
tatggaaataagagagaagtaggtattcctattatcaagctatctaaaggacaataaatt
cactttgaatgtgaagcctagaaaggtatcggtaaaatgcattctaaatggaatccagta
tgtatttcaactttctcagttgaacctgaaattattttcgatcaagaaatttaaaattta
gatattgaatagaagaaagctctagtaaatgcatgtcctactaaagtatttggtatcaat
cctcataccaatactttggaagtctaagatcacatgaaatgtatgtattgtgaagaatgt
gtttacaagtgtgctgaagacttctaaaaacctaaattaatcaaaatagaccataaaaag
gataagtttttcttcaaagtcgaaactacaggagttatgaagcctgttgaagtgttaaga
agaggtttttcaaccttgagatagaagcttgattttatgagagaataaatctaagaaaat
tctaataattaatttgaatatggtaacgagtga
DBGET
integrated database retrieval system
