Tetrahymena thermophila: TTHERM_00227160
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Entry
TTHERM_00227160 CDS
T01020
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tet
Tetrahymena thermophila
Pathway
tet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TTHERM_00227160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tet03021
]
TTHERM_00227160
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_00227160
Transcription machinery [BR:
tet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
TTHERM_00227160
Coactivators
SAGA/TFTC/STAGA complex
TTHERM_00227160
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
TTHERM_00227160
STAGA complex
TTHERM_00227160
TFTC complex
TTHERM_00227160
SAGA complex
TTHERM_00227160
SLIK complex
TTHERM_00227160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
KxDL
Motif
Other DBs
NCBI-GeneID:
7834013
NCBI-ProteinID:
XP_001014247
TGD:
TTHERM_00227160
UniProt:
Q23BW6
LinkDB
All DBs
AA seq
638 aa
AA seq
DB search
MSSQSNISGSMQAMRNQSQQQINYFEKIEKRLGQIREMLKWMQDMLMQIRKDLEWVGFRC
IYELYNECWKLESLQQQQQQQQLQIVNIASYMFSLGQLFLNLDIKDLIDKLCKYLLNRNQ
REQEMSKIKQIHEKYSEIYISLYSYECIVCYFNENQGTQDYCRDIFQKYIKKRIPSAFNK
NQSIPSLQNNDYQFHISKDKEDNERERNFLTNFDDINLFHKLEVVKKDKVKTSEIQVFQK
AYEYLDQLNSNNSNEVKPKCNLVYSVLEKSLMVNDFLERKHIESDSQHPSILKMRIDDPN
ESVTCIEVSKSGNIIMCGTQDSQIYLFDVGKFQNTNSSNQSDIIFGEENQEQYNSNSVQI
KFRTKFTGHEDAITSISILYNENYFISASIDLSIRLWDVRLNVCLNIYKGHLNTIWNVKF
ARQGYIFGSCSADKTAMLWTTNRPQIAKVLIGHQKDVTQIDFAENLEYVITASLDNKIKF
WELKTGTCALTLELNSPVTCMHMSYSGYYFITGQDNGDIRLWDLHNLKLIQSVNLQSLKS
RDPIYSVHISFDESTITVNTSKYLAYYNINQLNQIQGQHLYEEFDIGKEKYNQKIEFNRF
TPIEPKEIFELPKIQTEKFIKSYMHMRNFILAISKQTI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctaaagcaatatatcaggtagtatgcaggcaatgagaaattaatctcaatag
caaattaactattttgaaaaaattgaaaagagattaggctaaatcagagaaatgctgaag
tggatgcaggatatgttaatgcaaatcagaaaagatttagaatgggtaggatttagatgc
atttacgagctttataatgaatgctggaaattagaaagtttgcaataataatagcagcag
cagcaattgtaaattgttaatattgctagttatatgtttagcttaggttaattgttctta
aatttggatatcaaggacttaatcgataaactatgcaaatatctccttaatagaaatcaa
agagaataagaaatgtctaaaattaagcaaattcatgaaaaatacagcgaaatctatatt
tctttatactcatatgaatgtattgtttgctatttcaatgaaaattagggaacacaagat
tattgcagagacatattttagaagtacataaaaaaaaggataccatcagcatttaataag
aattaatctattccatctctttaaaacaatgattattagttccatatttcaaaagataaa
gaagataatgaacgtgaaagaaactttttgactaactttgatgatattaatctatttcat
aagttagaagtagtcaagaaagacaaagtaaaaacaagcgaaattcaagtattttaaaaa
gcctatgagtatcttgatcagctaaactctaacaacagcaacgaagttaagcctaaatgc
aatctagtttattcagttttagaaaaatctcttatggtgaacgatttccttgaaagaaag
catatagagtcagatagttagcatccaagcatattaaaaatgaggatagatgatcctaat
gagtctgttacatgtattgaagttagtaaaagcgggaatattataatgtgtggtactcaa
gattcatagatatatctttttgatgttggaaagttttaaaatacgaatagcagtaattaa
tctgacataatatttggagaagaaaattaagaataatacaactcaaatagtgtttagatc
aaattcagaaccaaattcacaggacatgaggatgctatcacctcaattagcattttatat
aacgaaaactattttatatctgcttctattgatctctctattagactgtgggatgttaga
cttaatgtctgtctcaacatatacaagggacatttaaataccatctggaatgttaaattt
gctcgttaaggttatatatttggctcttgctcagctgataagactgccatgctttggact
actaatagaccttagattgctaaggtattaataggacattaaaaagatgtaacttaaata
gactttgctgagaatctggaatatgtaattactgcttctttagataataagattaaattt
tgggaattgaaaacaggaacatgcgctttaacattagaattaaatagccctgtaacttgt
atgcatatgagttatagtggatattactttataacgggataagataatggagacataaga
ttgtgggatttacacaacttaaaattaattcaatctgtaaatttataaagcttaaaaagt
agagaccctatttattctgtacatatttcatttgacgaatctacaattacagtgaacact
tcaaaatacctcgcttactacaatataaactaattaaactaaatctaaggttaacatttg
tatgaagaatttgatattggaaaggaaaagtataatcaaaaaatagaatttaatagattt
actccaatcgaacctaaagaaattttcgaactgcctaaaatacaaacagaaaaattcata
aaatcttacatgcacatgcgtaatttcattctagcaatttctaagcaaacaatttga
DBGET
integrated database retrieval system
