Tetrahymena thermophila: TTHERM_00245150
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Entry
TTHERM_00245150 CDS
T01020
Name
(RefSeq) replication factor C subunit
KO
K10755
replication factor C subunit 2/4
Organism
tet
Tetrahymena thermophila
Pathway
tet03030
DNA replication
tet03410
Base excision repair
tet03420
Nucleotide excision repair
tet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TTHERM_00245150
03410 Base excision repair
TTHERM_00245150
03420 Nucleotide excision repair
TTHERM_00245150
03430 Mismatch repair
TTHERM_00245150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tet03032
]
TTHERM_00245150
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_00245150
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_00245150
DNA replication proteins [BR:
tet03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TTHERM_00245150
DNA Replication Termination Factors
ELG1-RFC complex
TTHERM_00245150
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TTHERM_00245150
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TTHERM_00245150
Check point factors
HRAD17(Rad24)-RFC complex
TTHERM_00245150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_16
AAA_assoc_2
AAA_14
AAA_5
AAA_11
DEAD
ResIII
DNAX_ATPase_lid
TIP49_C
AAA_30
Gp44_lid
AAA_24
AAA_28
bpMoxR
RuvB_N
AAA_19
nSTAND3
Mg_chelatase
AAA_3
SLFN-g3_helicase
Viral_helicase1
DUF815
AAA_2
ABC_tran
mTOR_dom
IstB_IS21
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
7828654
NCBI-ProteinID:
XP_001023745
TGD:
TTHERM_00245150
UniProt:
Q245Y3
LinkDB
All DBs
AA seq
373 aa
AA seq
DB search
MQGKLLFKGQAAPKGAAAGANTKDNNRMEEETKTEELNNNLLPWVEKYRPNKIEEVSYQE
EVIKSLQGVLLSGNLPHLILHGPPGTGKTSSILAFAKQLYGPTFYKERILELNASDDRGI
QIVRDKIKKFAQQVVSKNPDKSFKCPNFKIIILDEADSMTTEAQSALRRIIEDTSSTTRF
CIICNYITKIIEPLGSRCVKFRFKPIPLEAQITKLEEICKTEDIEYEKEALEKLIKISNG
DLRKSVNLLQSASTLYEKDIKVEVIEEISGSIPDNQVQKLYKLLIGKDFDKLKEGVKQFL
YQGYSPDQLLYQFSEYIISSKDFNEVKKARILEKIALADKGLNERADSELQILNMFSSCL
SVLQNPDTDLKKK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtagggcaaattactatttaaaggttaggccgctcctaagggtgctgctgcaggagca
aatacaaaggataacaatagaatggaagaagaaactaaaacagaagaacttaataataat
ttgcttccttgggttgaaaaatatcgtcctaataaaattgaagaagtcagctactaagag
gaagtaataaagtctctctaaggtgttttattatcaggaaatctacctcacttgattcta
catggacctcctggtactggtaaaacttcaagtatccttgcctttgcaaagcaactttac
ggaccaactttttacaaagagagaatcttagaattaaatgcatctgatgatagaggtatt
caaatagtcagagataaaataaaaaaatttgcacaataagttgtctctaagaatccagat
aaatcatttaaatgcccaaatttcaaaattattattttggacgaagcagactcaatgact
acagaagctcagtcagctttaagaagaatcattgaagacacctcttcaaccactcgtttt
tgtattatctgtaactacattactaagattatagaaccattaggtagtagatgtgtcaaa
ttcagatttaaacctattccacttgaagcttaaataactaaactagaagaaatatgtaaa
acagaagatattgaatatgaaaaggaagctcttgaaaaattaattaaaatatcaaacggt
gatttgagaaaaagtgtaaatcttctataatctgcatctactttgtatgaaaaggatatt
aaagttgaagttattgaagaaatttcaggaagtattcctgacaattaagtatagaaatta
tataaacttcttattggcaaggattttgataaattaaaagaaggagttaaatagttctta
tactaagggtattctcctgattaattactttactaattctcagagtatatcattagttct
aaagatttcaatgaagttaaaaaagctagaatccttgaaaaaattgcattagctgataaa
ggtttaaacgaaagagcagactctgagttgcaaatattaaacatgttctcaagctgtctt
tctgttttacaaaatcctgatactgatttaaagaaaaagtga
DBGET
integrated database retrieval system