Tetrahymena thermophila: TTHERM_00294740
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Entry
TTHERM_00294740 CDS
T01020
Name
(RefSeq) vps16, amine-terminal region protein
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tet
Tetrahymena thermophila
Pathway
tet04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
TTHERM_00294740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tet04131
]
TTHERM_00294740
Membrane trafficking [BR:
tet04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
TTHERM_00294740
Hops complex
TTHERM_00294740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
7833301
NCBI-ProteinID:
XP_001013106
TGD:
TTHERM_00294740
UniProt:
I7M0W9
LinkDB
All DBs
AA seq
991 aa
AA seq
DB search
MIFHEDIINLGEKPYEYKDFFTMDSKIQEDNIKLSYFHSAVAKYGGPIALMRNKNKIVPN
LKTSVLNNELCFLTSDGVIFNHIKFDYQGRDVVCFDFLQNELLLILTSNPPVYYLVDPFR
NEQNLKPYNLDTKFQSNIYQAKAFGNGFAFCAKITNQNQPEEVRFFYVDNLHMQTRDKII
PEKAFYKSGIKEMPRDWIIMTKDQSELKTLEIQMTHPESGVISLTETNRKLYYQIPDVNQ
SDKASAQPKQVSSSLPPIKNIQFIALSPSNSLIAYLQEVGNGKIKLSVLSNDYEAKRYTV
CDVDLKGLKLPNTISSKESQLQMMWCGDDCCVLQIDQSILMIGPDVTEIIQINEDFIMSK
EVDGIRIITKKGDKLLRSLPDAFLNVYPEYISNWDSQKPAAKLLQNYLNLKSKQPFDDSD
LRSNPAQLRQAVKDCMTVAAFITDEEKQKDLLKAASYGKTYLGPDAINHDEFGLLCQKLR
VVYNFREVSIKRMITCAQVNNLLSGDLQQQLINIMLRYDYHELAFNVCNQLDFKPKVRTY
IFEHWAERVIEKSSAAARQHEQRNSNDLGGIGGNKDSWNSMQYNADNEDNRVAEKIISKL
RNEKNVSFVNIAKRATKECRQNLAMKLLYQEPSAFKRVPVLIWMGKNCLEFESNALTQSG
LDRNEIEEKLKSKEWKEDVQTRQARHYENALQQALQSRDSELIYMCLKEMDTYMKNETLK
FHVLKSEQIYANHYKNYLKNSSSQSKQERYKNFINYCNNDQGLEKVSYFIKNSFQTNYKK
STKENLINRHENLRQALKEINQKKIDDNFLGQALLKEIQSLEYILGSPTDELNKHFIDEI
LEWTVNKSLSDTLARDAKSIKDKIKDFNVSQKRTDFLKVRNLIKEKDYEQLEFFLVKEVN
KKNVVIPYELVADLLIKEGAKDQAVRLILNIPKMEERVTILLKIDEAKRAVQDVINSRKN
LDLLEMIREQCRDPSVISYMENQLQSAGLRK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcacgaagatattatcaatttaggagaaaagccatatgagtataaagatttt
tttactatggactctaaaatataagaagataatataaagttaagttattttcacagtgca
gtagctaagtatggtggtccaatagctctcatgagaaataaaaataaaattgttcctaac
ttaaaaacttctgttttgaataatgaactatgttttttaacatccgatggtgttattttt
aatcatataaaatttgattatcaaggtagagatgtagtttgttttgatttcctataaaat
gaattgcttttaattcttactagcaatcctcctgtgtattacttagttgacccattcagg
aatgaataaaatcttaaaccctataatttggatacaaagtttcaaagtaacatctatcaa
gcaaaggctttcggtaatggatttgcattttgtgcaaaaataaccaattaaaactaacca
gaagaagtaaggttcttttatgttgataatttgcatatgcaaacaagagacaaaattatt
ccagaaaaagctttctataaatctggaattaaagaaatgccaagagattggattataatg
acaaaggattaatctgaattaaaaacactagaaatataaatgactcaccctgaaagcggt
gttattagcctaactgaaactaatcgtaaattatattaccagattcctgacgtaaatcaa
tcagataaagcttcagcttaacctaaataagtctctagtagtcttcctcctattaaaaat
atacaatttatagctttgtcacctagcaattctttgatagcttacttataggaagttgga
aatggaaaaattaagcttagtgtactttcaaatgattacgaagctaagagatatacagtt
tgtgatgttgacttaaaaggacttaaattgccaaatactatttcttccaaggaatcataa
ttgcagatgatgtggtgtggtgatgactgctgtgtattataaatagattaatctattctt
atgatagggccagatgttacagaaatcatttaaattaatgaagattttatcatgtcgaag
gaagtagatggaataagaatcataacaaagaaaggtgataaattgctccgttcattacca
gatgcttttttaaatgtatatcctgagtacatatcaaattgggattcataaaaacctgca
gctaaattacttcaaaattatttgaatttgaaatcaaagcaacctttcgatgactcagat
cttagaagcaacccagcttaacttagataagcagtaaaagattgtatgacagtagctgca
tttattacagatgaagagaaataaaaagatcttctaaaagcagcatcttatggaaagact
tatttgggaccagatgcgattaaccatgatgaatttgggcttttgtgtcaaaaattaagg
gttgtttataattttagagaagtgagtatcaaacgtatgataacttgtgcataggttaat
aatctgctctcaggagacttgtaataacaattgataaatataatgcttagatacgattat
catgaattagcctttaatgtatgtaattaacttgattttaagccaaaagttagaacttat
atttttgagcattgggctgaaagggtcattgaaaagagttctgctgcagcaagatagcat
gaacaaagaaacagtaatgatttaggaggcataggaggaaataaagattcatggaattct
atgtaatataatgccgataatgaggataacagagtagctgaaaaaatcataagcaagctt
agaaatgaaaagaatgtttcatttgtaaatatagctaagagagctacaaaagagtgtaga
taaaatttagcaatgaaactactttactaggagccatctgcattcaaaagagttccagtt
ttgatttggatggggaaaaactgcttagaatttgaatcaaatgccctaacttaaagtgga
ttagacagaaatgaaattgaagaaaagcttaaatctaaggaatggaaagaagatgtttaa
actaggtaagcacgtcattatgaaaatgcgctctaataggcactttaaagtcgcgatagt
gaattaatttatatgtgcttaaaagaaatggatacatacatgaaaaatgaaactttaaag
ttccacgtgttaaaaagtgaataaatttatgctaaccattataaaaactatttaaaaaac
agttcttcttagtctaaacaagaaagatataaaaattttataaattattgtaataatgat
taaggtttagaaaaagtaagctacttcatcaagaatagcttttaaactaactataagaag
tctacaaaagaaaatttgataaacagacatgaaaatttaagacaagctttaaaagaaatt
aattaaaagaaaatagatgataactttttaggataagcactattaaaagaaatttaaagt
ttggaatatatactgggcagtcctacagatgaattgaacaaacacttcatagatgaaatt
ttagaatggacagtcaataagagcttatcagacactttagcacgtgatgccaaatcaatc
aaagataaaataaaagactttaatgtttcttaaaagcgtacagattttttaaaagttcgt
aatttaataaaagagaaggattatgagtagcttgaatttttcttggttaaagaagttaat
aaaaagaacgttgttattccctacgaattggttgccgatttactaataaaagaaggagca
aaagactaagcagttcgtttgatattaaatattccaaaaatggaagaaagagttactatc
cttctcaaaatcgatgaggcaaagcgtgccgtgtaagatgtaatcaattcaagaaaaaat
ttagacttacttgaaatgattagagaacagtgtagagatcctagtgtgattagttacatg
gaaaattaactttaatcagctggtcttagaaaatga
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