| Entry |
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| Name |
(RefSeq) DNA mismatch repair MutS family DNA-binding domain protein, putative
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| KO |
| K08735 | DNA mismatch repair protein MSH2 |
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| Organism |
tet Tetrahymena thermophila
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tet00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TTHERM_00295920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:tet03400]
TTHERM_00295920
DNA repair and recombination proteins [BR:tet03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TTHERM_00295920
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| AA seq |
813 aa
MEEEIELVNDKNLMVLAVYFTYPNNTRQVNAAILDSDQRKFQVTEFQDTEYYSNFESLIL
QTNPQNQHTQFLLLIQYPDLTTEKEKVNDIVQQCDINVKEKDKKSFLEKGYEDDLNKLLK
KPLAQYIQESQLTHALSSLACIVGDLQLSKEPTNQNQFTVETLILNNFMKLDLAAINALL
IFPKEKDIQRRNLMGGQENNFSTLVDLLDKCKTQIGSRTLKRWIKQPLKNEAEINRRLDI
VEYFVNNQDLRNYIQNEFLRKIADLDKLYAKFYKVASKKKHNASLADCIKVYQLVTNLST
LAQYIENNHSADELAQREFLIPLGEILENFEKLSSMIDQSIDMEKARRDNEYQVSSKFSP
TLAELAKQMKQIMKQIESLRNEYAQELGVEPKLVESTTHTYLFESKKKETDEAFRRLHSR
KYKSISVKKGCISFTTDELQACVAEYNSLKDNYQEEQKSVVQKILDVVSTYYPAMERASF
VISELDVLANFASLVNSATRPYVKPNIHASNKQINLVESRHPCLEVMDNNCVANDCFMDN
DKSRFHIITGPNMGGKSTFIRQVAICVLLAHIGCFIPCKSGEMPIIDAIITRVGASDMQL
RGISTFMSEMLEASNMLMTATENSLIIIDELGRGTSTSEGFGIAWAISEHIANKIKCYCL
FATHFHEMTKMEQEVKGVINYYVSCVTIDNKLTMQYKLKRGFAERSYGLFVAETLDFPRE
ILEHASNKLLELESYSKGISENQSSDQNFENFNKNSQTDDIFLLSKNSTIAQKEAVVDLA
SSYNEKIRNAASKEQKKQLLNELKQKIISALKS |
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| NT seq |
2442 nt +upstreamnt +downstreamnt
atggaagaggaaattgaattagttaatgataagaacttgatggttcttgctgtttatttt
acttacccaaacaatactcgttaagtaaatgctgctattttagacagtgattaaagaaaa
ttctaagttacagaattctaagacacagaatattactcaaattttgagtccctcattctc
tagaccaacccttaaaattagcatacccaatttttgttgttaatccagtatccagatttg
acaacagaaaaagaaaaagtcaatgatattgtttaacaatgcgacattaatgtgaaagaa
aaggataagaaaagttttttagaaaagggttatgaagatgaccttaataaattattaaaa
aaacctttagcctaatatatttaagaaagttaacttactcatgctttgagtagtttggct
tgtattgtaggtgatttataactgtctaaagaacctactaattaaaattaattcactgtt
gagacattgatcttgaataattttatgaaattggatctcgctgctattaatgccctttta
attttcccaaaagaaaaagatatctagagaagaaacttaatgggtggtcaagaaaataat
tttagtacattagttgacttattagacaagtgcaaaactcaaattggcagtagaacctta
aagcgctggataaagcaacctcttaaaaatgaggctgaaatcaatagaagacttgatatt
gttgaatattttgtcaacaattaagatttgagaaactacattcaaaatgaatttttaaga
aaaatagctgacttagataagctatatgctaaattctataaagtcgctagtaagaaaaag
cataacgctagtttagctgattgtatcaaagtctatcaacttgttactaatctaagtact
ttagcacaatatattgaaaataaccactcagctgatgaattagcatagagggaattttta
atacctttaggggaaatacttgaaaattttgaaaagctttctagtatgattgattaatca
atagatatggaaaaggcgagacgtgataatgaatactaagttagttctaaattctctcca
actttagcagaacttgcaaaacaaatgaaataaatcatgaagtaaattgaatcattaaga
aatgaatatgcataagaattaggagttgagcctaaattagtggaatctactactcacact
tatttgtttgaaagtaaaaagaaagagacagatgaagccttccgtcgtctccatagtcgt
aagtataaatctatttcagttaagaaaggctgtatttcctttacaactgatgaattataa
gcttgtgtagctgagtataacagcttaaaagataactattaagaagagtagaagtctgta
gtttagaaaatattagacgtcgtttctacatactaccctgctatggaacgtgcaagtttc
gttatttctgaattggatgttcttgctaactttgcttctttagttaactcagccactcgt
ccatatgtcaaacccaatattcatgcatcaaataagcaaattaacttagtagaatctcgt
catccctgcttagaagtaatggacaataattgtgtagcaaatgactgctttatggataat
gacaagtctcgtttccatatcattactgggccaaatatgggtggtaaaagtacttttatt
agataagttgccatatgcgttctattagctcatattggttgctttataccctgcaagagt
ggtgaaatgcctatcattgatgcaatcattacaagagtaggtgcaagtgatatgcaactt
cgtggtattagtactttcatgagtgaaatgttagaagcttctaacatgttaatgacagca
actgaaaattctttaattataatcgatgaacttggtcgtggtacttctacaagtgaagga
tttggtatcgcatgggctatttcagaacatattgctaataaaatcaaatgttattgctta
tttgcaactcatttccatgaaatgaccaaaatggaacaagaagttaaaggagtaattaac
tattatgtaagctgtgtaacaatagacaataaattgactatgcaatataaattaaagaga
ggttttgctgagcgtagttatggtttgtttgttgcagaaactttagatttccctagagaa
attcttgagcatgcctcaaataagcttttagaactggaaagttattcaaagggaatttct
gaaaaccagagctcggattaaaattttgagaatttcaataaaaatagctaaacagacgac
atatttttacttagtaagaactcaacaattgctcaaaaagaagctgttgttgatcttgct
tcttcctataatgaaaaaataagaaatgctgcttctaaagaataaaagaagtaactactt
aatgaattaaaataaaaaattatttctgctttaaaatcttga |
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