Tetrahymena thermophila: TTHERM_00304150
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Entry
TTHERM_00304150 CDS
T01020
Name
(RefSeq) SNF5/SMARCB 1/INI1 family protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
tet
Tetrahymena thermophila
Pathway
tet03082
ATP-dependent chromatin remodeling
tet03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TTHERM_00304150
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
TTHERM_00304150
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tet01009
]
TTHERM_00304150
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tet03021
]
TTHERM_00304150
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_00304150
Protein phosphatases and associated proteins [BR:
tet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
TTHERM_00304150
Transcription machinery [BR:
tet03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
TTHERM_00304150
SWI/SNF complex
TTHERM_00304150
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
TTHERM_00304150
PBAF complex
TTHERM_00304150
SWI/SNF complex
TTHERM_00304150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
HTH_Tnp_1
Motif
Other DBs
NCBI-GeneID:
7843179
NCBI-ProteinID:
XP_001020992
TGD:
TTHERM_00304150
UniProt:
I7MFW8
LinkDB
All DBs
AA seq
351 aa
AA seq
DB search
MSLTVTYNSGMVKKPLYQRVHEVLNRLGLFYQDICVEANINEESLIQWVNQDPEYDYAEL
ELSLEKWIDSKYQRSQNNDEKQYYQIRSQYLKRLDINQQLANQWLEAPNIDKIPQNDQPN
EYLIPISIDIELDGQTFKENIIWNYYEPYFTPENFAHHLAKENRLSPNIEQEVVNVIRRA
LQNYRFYDPKERELIRTIELNILIENVQLKDRFEWDINDFTNSPEQFAFNMCNELGLSGE
FAQRIAYQIREQILSFQKQIMERRINQTASNFKKSTRSLIESSQNFTNFDPKIHIQGNTV
ITEENYLRPVLQDNDYDSFQWEPKISILQPDDIRKVQKEEQRKQRLMRRTR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaactgtaacttataatagtggaatggttaaaaagccattatactaaagagta
cacgaagtacttaatcgcttaggtttattttatcaagacatttgtgtggaggcaaatata
aatgaagaaagtttgatttagtgggtaaactaagaccctgaatatgattatgccgaatta
gagctttctcttgagaaatggatagattcaaagtactagcgttcatagaacaatgatgaa
aaataatattattaaattcgttctcaatatttaaaaagattagatataaattaatagcta
gcaaactaatggctagaggcaccaaatattgataaaattccttaaaatgaccaaccaaat
gagtatctaatacctataagcattgatattgaattggatggatagacttttaaagaaaat
ataatttggaattattatgaaccatattttactccagaaaactttgctcatcacttagca
aaagaaaacagattaagtcctaatatagaataagaagtagttaatgtaatccgcagagct
ctttaaaactatcgcttctacgatcctaaggaaagagagctcatccgtactattgaatta
aatatattgatagaaaatgtatagctaaaagatagatttgagtgggatattaatgatttc
acaaattctccagaataatttgcttttaatatgtgcaatgaattaggtcttagtggagaa
tttgcatagagaatagcgtattaaataagagaatagattctctccttctaaaaataaatt
atggaaagacgtataaactaaactgcatctaatttcaagaagtctactcgttctttaatt
gaatcctcttaaaatttcacaaactttgaccccaaaattcacatctaaggaaatacagta
attacagaagaaaattatttacgtcctgtactttaagataatgattatgatagttttcaa
tgggagccaaaaatttcaatcttataaccagatgatattagaaaggtatagaaagaagaa
tagagaaagcaacgtcttatgcgtagaactcgttga
DBGET
integrated database retrieval system
