Tetrahymena thermophila: TTHERM_00304170
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Entry
TTHERM_00304170 CDS
T01020
Name
(RefSeq) RNB-like protein
KO
K18758
DIS3-like exonuclease 2 [EC:3.1.13.-]
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_00304170
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TTHERM_00304170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
7843181
NCBI-ProteinID:
XP_001020994
TGD:
TTHERM_00304170
UniProt:
I7MKZ5
LinkDB
All DBs
AA seq
1355 aa
AA seq
DB search
MQLTIQEQYQKEAKKRNYKHKKFYKKSNFLLRSKIQLLTIQQTNKQINLQTVYQRQLIFL
IYIHINQPLYYIQKNTYKSKQTKKISYINQQMINQIQRAQFILKKMNQKNIIQKTPQFLQ
FINQFQNQQKSEYAQIFITKSPNSSFISGQPAGFDNTNSLSSQNSDCSLFGSNQNRTTYS
SSSNNKKPSSYINSNEHIQNQWMKKVDDLNKQTEQANQQNLLKRGKQCVQVDSHLEDIPS
QSWKDYQELQKQQILIEEANSNSQTQQKEVDKKAELKKQKKVKRDKNGEVIIKTSKQPEN
ADQLRERLALHEQMMLLPKNERNKALLSQKKRDERWDKQALTHKQVAHYSGSATEQDKKR
AVEEILAQNQIKKQIKESKKAKLPVIEKEQADIFDEMIQMLKESGEVKTKKEKKQIKEDL
ITEIISEKESQKNKKQNSSSSNGDESKGVKRHNEKRKAKKENSDLLQEENNECIEGHPQK
KDSKQSNKNGSDSQNNQVQLSVSDKLADFLDNELINPYRKNIKQEKKLSKSKKSQAQEYF
DEESKDEQKNHNYKNGIKKNKNKQFQSFEPHWSSQQINDAIKQKKAFKGVYTANEKNQQL
GRIKCDEIDGLVFINSYIYQNRALHNSVVGFVIIQGDPSSRLKNIEGNSDINLKKIQADN
LNENEESLDKSLEEEIDDNEEDWETDSEDNLPPVDQSKLVAKIVYIFENPYQNDNIVGYL
EEVQDNRQKKNGKKKYWFIPKYSKLPKMLPVEFSDEFYHQVEENDIDISKTYVVGKMKDW
SEESYYPQATISECLGERGDIEVECDTLLKEFNVYNQDFTPATEEYLNKYREQLNDNGEY
VIPESEKNIRWDLTKEIICTIDPHDAKDLDDALSIKYLHDDIYEIGVHIADVSHFVQPNT
SLDDDARLRTTSVYLVHRVIPMLPRLLCENLCSLNPNVERLAFTVFFQMKENGEVLWDGP
IRIGKSVIKSCNKFSYDTVQMMIEKKIKSPGELPEHNIPQQGVDSQKMFDDILLLAKLGM
NRRESRFKGGVLSIESVKKRFKLNEKLWPVDFTLEERKDAMFVVEEFMLLANQIVAKEMV
KQCKSLAVLRQHCYPSDIKQKQLNVIAKKFGHQIDFSSLQAINQSIEDIKKDDKLSFEKK
LFLKKQMFLVLEQALYFVADQLPPSEWKHFALNFDVYTHFTSPIRRYPDLLVHRVMYSIL
QYKQDAVKYIEKSSLLSIMEVCNENKAKSKQVSDNCQKIFMCLYLKDHSVQSKGMVISFG
VTSMTIFIPDHETQRTVYFKDYKNILKAKVEKEKDGNKLMITYKTASMPRENTVYFHEFS
PIIVSLTSTDTFPIDYKVKISLPDPDDKKVTHVLE
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgtaattgacaatctaagaataatattaaaaagaagccaagaaaagaaattataagcat
aagaaattttataaaaaatcaaattttcttttaagatcaaagatttaattgctgactatt
taacaaacaaacaaacaaataaacctacaaacagtttatcaaagatagttaatttttctg
atatatattcacattaattaacctttatactacatataaaaaaacacatataaatcaaaa
taaacaaagaagatttcttatattaattaataaatgattaattaaatacaaagagcctaa
ttcatcctaaaaaaaatgaattaaaaaaatattattcaaaaaacgccctagttcttacaa
tttataaaccagttctagaattaatagaagagtgagtacgcttagatatttattactaag
agtcctaactcttcttttatttctggctagcctgcaggatttgacaatacaaacagtctt
tctagttaaaactcagattgttctttatttggtagcaattagaatagaactacttatagc
tcttcctctaataataagaagccatcttcatacataaacagcaatgagcatatttaaaac
tagtggatgaaaaaagttgatgacttaaacaagcaaactgagtaagcaaattagtagaat
ttgcttaaaagaggaaaatagtgtgttcaagtagattcacatttagaggatataccttct
caatcttggaaagactattaagagctataaaagcaatagattttaatcgaagaagcaaac
agcaattcatagacatagtagaaagaagtagataaaaaagcagaattaaagaagcaaaag
aaagtaaaaagagataaaaatggtgaagttataattaaaacaagcaagcaaccagaaaat
gcagactaattgagggagagattagctcttcatgagtaaatgatgcttttacctaaaaat
gagagaaataaagccttattgagctaaaagaaaagagatgagcgttgggataagcaagct
cttacacacaaataggtagctcattattcaggtagtgcaactgaataggataagaagaga
gctgtagaagaaatactcgcctaaaatcaaataaaaaaacaaataaaggaatctaaaaag
gctaaattacctgtgatcgaaaaagagtaagcagatatttttgatgagatgatacaaatg
ttaaaagaaagtggtgaagtcaagacaaaaaaagaaaaaaagcaaattaaagaagatcta
atcaccgaaataatttcagaaaaagaatcttaaaaaaataaaaagcaaaattcaagttct
tcaaatggtgatgaatcaaaaggagttaagagacataatgaaaagcgaaaagctaaaaaa
gaaaattctgacttattgtaagaagaaaataatgagtgcatagaaggccatccttagaaa
aaggatagtaaacaatcaaataaaaacgggtcagatagttaaaataatcaagtttaactt
tctgtatctgataaattagcagatttccttgataatgagctcattaatccttacagaaag
aatataaagcaagaaaagaagttatcaaagagtaaaaaaagtcaagcccaagaatacttt
gatgaagaatctaaagatgaataaaaaaaccataattacaaaaatggaattaaaaaaaat
aaaaataaataattctaatcttttgagccacattggtcctctcaataaattaatgatgct
ataaaataaaagaaagcattcaagggtgtttatactgctaatgagaagaaccaataactg
ggtcgcataaaatgtgatgaaatcgatggtttagtatttataaattcctatatatactaa
aacagagcacttcacaatagtgttgtaggttttgtgattatttaaggcgatccttcaagt
agattgaaaaatattgaaggtaattctgatataaacttgaaaaagatttaagcagataac
ctaaatgaaaacgaagaatcactagacaaaagtttagaggaagaaatcgatgataacgaa
gaagactgggaaactgattctgaagataatctacctcctgtagatcaatctaaattagta
gctaaaattgtctacatatttgaaaatccatactaaaatgacaatattgtcgggtatctt
gaagaagtctaagataatagataaaaaaagaatggtaaaaagaaatattggttcattcct
aagtacagcaaattacctaaaatgttacctgtagaattctcagatgagttctaccattaa
gttgaagaaaatgacatcgatattagtaaaacctatgtagttggtaaaatgaaagattgg
agcgaggaaagctattatccataagcaacaatcagtgaatgtctaggtgagagaggtgat
attgaagtagaatgtgatacacttcttaaggagttcaatgtttataatcaagatttcact
ccagcaactgaagaatatttaaataaatacagagaatagcttaatgataatggcgaatat
gtaattcctgaaagtgaaaagaatattagatgggatctaacaaaagaaattatatgtact
attgatcctcacgatgctaaggatttagatgatgcactaagcattaagtatttgcacgat
gatatatacgaaataggtgttcatattgcagatgttagtcactttgtttagcctaacact
tctttagatgatgatgcaagattaagaactacttctgtttatctcgtccatagagttatt
cctatgcttcctcgtttactttgtgaaaatctatgtagtttaaaccctaatgttgaaaga
ttagcattcacagtatttttctaaatgaaagaaaatggtgaagtgttatgggatggtcct
attagaataggaaagagtgtaattaaatcttgtaataagttctcttatgatactgtttag
atgatgatagagaagaaaattaagtcaccaggagagcttcctgagcataatataccttag
taaggagtggactcacaaaaaatgtttgatgatattctacttttagctaagttaggtatg
aatagaagagaaagcagatttaagggtggtgttttatctattgaaagtgttaagaaaaga
tttaaactcaatgaaaaattatggcctgtagattttactcttgaagaaagaaaggatgct
atgtttgttgtagaagaatttatgttattagcaaactaaattgtagctaaagaaatggta
aaacaatgcaaatcacttgctgtccttcgttaacattgctatccttcagatataaagcaa
aagcaactgaatgtaattgctaagaaattcggacattaaattgatttctccagcttacag
gctattaactaatcgattgaagatattaaaaaagatgataagctctcttttgagaaaaaa
ttatttttaaaaaaataaatgtttttggttttagaacaagctctctattttgttgcagac
taattacctcccagtgaatggaaacactttgcattaaacttcgatgtttacactcacttt
acatctcctattagaagatatcctgatttattagttcacagagttatgtacagtatcctt
taatacaaataggatgcagtcaaatatattgaaaaatcctccttactttctataatggag
gtgtgcaatgaaaataaagccaaatccaaacaagtttcagataactgttaaaaaatcttc
atgtgtctctacttgaaagaccactctgtttaatcaaaaggcatggtaatttctttcggt
gtcactagcatgaccattttcataccagatcatgaaacctaaagaactgtttacttcaaa
gattataaaaatatcttgaaagctaaagtagaaaaagaaaaagatggtaataagttaatg
attacatataagactgcaagcatgcctagagaaaacactgtttacttccatgaattctct
cccattatagtaagtctcacaagcacagatactttccctatcgattataaagtaaaaatt
tctcttccagatccagatgataaaaaagttactcacgttttggaatga
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