Tetrahymena thermophila: TTHERM_00316680
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Entry
TTHERM_00316680 CDS
T01020
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tet03009
]
TTHERM_00316680
Enzymes [BR:
tet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TTHERM_00316680
Ribosome biogenesis [BR:
tet03009
]
Eukaryotic type
Pre-60S particles
Helicases
TTHERM_00316680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
7829752
NCBI-ProteinID:
XP_001021360
TGD:
TTHERM_00316680
UniProt:
I7LW78
LinkDB
All DBs
AA seq
610 aa
AA seq
DB search
MNTLKQKWEDLETRLFPQVEKCVKDALGYETMMPVQKATIPLFIKNHDLAVEAQTGSGKT
LAFLLPIFNVLIKQVKTANKNCVYALVIAPTRELAKQIHEIAVQLASHLENNQFSIQLCI
GGVSTKIDVSNIQSQGANILIATPGKLKELMDMKELEDSLIFRNLEILIMDEADRLMDTE
YYEDMTYALEKLPKQRRTGLFSATLSSAKLSELIKYGLRNPVKVSVKPGGEKANNTNYVV
PSTLENSYLILDNRFQKIAFMLNFILKYPEEKTILFLNTCASVDFYQKIFKMYSLIKKIQ
ITSVHGQMKQVKRNKIIENFTKSQKGVLICTDVVARGIDFQDVHHILQIDPPQDPSFYIH
RIGRTARKGKSGKAIILIEKHEEAFVEFLRIKNVEIQEYNNSEQIECDPLKFEEDIKKIM
IQDRDNIEKSKKAFISYIRSYMEHDLKYIFEFKDLDIGWVARSFFLLRLPRIKEILSKHI
KNFHQSEIDPDTIPFQDKNQEQQFSLKQEERTQKRQEREEHAEKQQKQLEKKQKEKNMRQ
VRRKQKREVLEEEQDEFSLELNLAKKLKQGKITLQEYKKRMKEIDPEDLHDVEFTKKQIV
SISGHKKKKK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattaaagtagaaatgggaggatttagagacaagactcttcccttaggttgaa
aaatgtgtcaaagacgctttaggctatgaaactatgatgcctgtttagaaagctacaatc
ccattatttatcaaaaaccatgatttagcagtagaagcataaactggaagtggcaaaaca
ttagcatttttgcttcctatctttaatgttttgataaagcaagtaaaaacagcaaataaa
aattgtgtttatgcattagttattgctcctactagagagttagcaaaataaattcatgaa
atagctgtttagttagcgagtcatttagaaaataattaattcagcattcaactttgtata
ggtggtgtaagcactaaaatagatgtatctaatattcagtcataaggtgctaacatttta
attgccactcctggtaaactcaaagagctgatggatatgaaagagttagaagatagttta
atttttaggaatcttgaaatattgattatggatgaagcagatagattaatggatacagag
tattatgaagatatgacctatgcattagaaaagcttccaaaataaagaagaacaggcttg
ttttcagcaactttgagctctgcaaaattaagtgaattgattaaatacggtctccgtaac
ccagttaaagtttcagtcaaacctggtggtgaaaaagctaataacactaattatgttgtt
ccttccaccctagaaaactcttacttgattcttgacaatagattttaaaagatagcattt
atgcttaatttcattttaaagtatcctgaagagaaaactatccttttcttaaatacttgt
gcaagtgttgacttttactaaaaaattttcaaaatgtacagcttaattaaaaaaatacaa
attacttctgtgcatggataaatgaaataagttaaaagaaataaaattattgaaaacttt
acaaagagctaaaagggagtcttaatttgtacagatgttgttgcaagaggtatagatttc
taagatgtccaccatattttataaatagatcctccataagatccaagtttttacattcat
agaataggtagaacagctagaaagggaaaatcaggaaaggctattatactcattgaaaaa
catgaagaggcatttgtagaatttctaagaattaaaaatgttgagattcaggaatacaat
aattctgaataaatagaatgtgatcccctaaaatttgaagaagatattaaaaaaataatg
atataagatagagataatatagaaaaatctaaaaaagcatttatttcttatattaggtct
tacatggaacatgatcttaagtatatatttgaattcaaagatttagacataggttgggtg
gctcgctcattctttttattgagactgcctcgtattaaggaaattctcagcaaacatata
aagaattttcattaaagcgaaattgatccagacactataccattttaagataaaaattaa
gaacaatagttttctcttaaataagaagaaagaacataaaaaagataagaaagagaagag
catgcagaaaagcaataaaaataattagagaaaaagtaaaaagaaaagaatatgcgttag
gtgagaagaaaataaaaaagggaagtattagaagaagaataagatgaattttccttggaa
ttaaacttagcaaagaagctaaaatagggtaaaattactctttaggaatataaaaaacgt
atgaaagaaatagatcctgaagatttacatgatgttgaatttactaagaaataaatagta
tcaatttcaggtcataagaagaagaagaaatga
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